Mercurial > repos > galaxyp > openms_labeledeval
comparison LabeledEval.xml @ 11:01d8dbc6ccf7 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 55a2aeba8bfd8a6910630721de9857dcdfe05d3c"
author | galaxyp |
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date | Tue, 13 Oct 2020 20:27:10 +0000 |
parents | 6af4a3054890 |
children | 45b7070b3366 |
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10:faed4bd76de4 | 11:01d8dbc6ccf7 |
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45 <param name="in" argument="-in" type="data" format="featurexml" optional="false" label="Feature result file" help=" select featurexml data sets(s)"/> | 45 <param name="in" argument="-in" type="data" format="featurexml" optional="false" label="Feature result file" help=" select featurexml data sets(s)"/> |
46 <param name="truth" argument="-truth" type="data" format="consensusxml" optional="false" label="Expected result file" help=" select consensusxml data sets(s)"/> | 46 <param name="truth" argument="-truth" type="data" format="consensusxml" optional="false" label="Expected result file" help=" select consensusxml data sets(s)"/> |
47 <param name="rt_tol" argument="-rt_tol" type="float" optional="true" value="20.0" label="Maximum allowed retention time deviation" help=""/> | 47 <param name="rt_tol" argument="-rt_tol" type="float" optional="true" value="20.0" label="Maximum allowed retention time deviation" help=""/> |
48 <param name="mz_tol" argument="-mz_tol" type="float" optional="true" value="0.25" label="Maximum allowed m/z deviation (divided by charge)" help=""/> | 48 <param name="mz_tol" argument="-mz_tol" type="float" optional="true" value="0.25" label="Maximum allowed m/z deviation (divided by charge)" help=""/> |
49 <expand macro="adv_opts_macro"> | 49 <expand macro="adv_opts_macro"> |
50 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overwrite tool specific checks" help=""/> | 50 <param name="force" argument="-force" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Overrides tool-specific checks" help=""/> |
51 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> | 51 <param name="test" argument="-test" type="hidden" optional="true" value="False" label="Enables the test mode (needed for internal use only)" help=""> |
52 <expand macro="list_string_san"/> | 52 <expand macro="list_string_san"/> |
53 </param> | 53 </param> |
54 </expand> | 54 </expand> |
55 <param name="OPTIONAL_OUTPUTS" type="select" multiple="true" label="Optional outputs" optional="true"> | 55 <param name="OPTIONAL_OUTPUTS" type="select" optional="true" multiple="true" label="Optional outputs"> |
56 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> | 56 <option value="ctd_out_FLAG">Output used ctd (ini) configuration file</option> |
57 </param> | 57 </param> |
58 </inputs> | 58 </inputs> |
59 <outputs> | 59 <outputs> |
60 <data name="stdout" format="txt" label="${tool.name} on ${on_string}: stdout"> | 60 <data name="stdout" format="txt" label="${tool.name} on ${on_string}: stdout"> |
69 <expand macro="manutest_LabeledEval"/> | 69 <expand macro="manutest_LabeledEval"/> |
70 </tests> | 70 </tests> |
71 <help><![CDATA[ Evaluation tool for isotope-labeled quantitation experiments. | 71 <help><![CDATA[ Evaluation tool for isotope-labeled quantitation experiments. |
72 | 72 |
73 | 73 |
74 For more information, visit http://www.openms.de/documentation/UTILS_LabeledEval.html]]></help> | 74 For more information, visit http://www.openms.de/doxygen/release/2.6.0/html/UTILS_LabeledEval.html]]></help> |
75 <expand macro="references"/> | 75 <expand macro="references"/> |
76 </tool> | 76 </tool> |