diff MultiplexResolver.xml @ 7:8023d63040f6 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5

--- a/MultiplexResolver.xml	Tue Mar 20 15:09:44 2018 -0400
+++ b/MultiplexResolver.xml	Fri May 17 04:44:47 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>MultiplexResolver
+  <command detect_errors="aggressive"><![CDATA[MultiplexResolver
 
 #if $param_in:
   -in $param_in
@@ -77,7 +77,7 @@
   -labels:ICPL10 $adv_opts.param_labels_ICPL10
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in" type="data" format="consensusxml" optional="False" label="Peptide multiplets with assigned sequence information" help="(-in) "/>
     <param name="param_algorithm_labels" type="text" size="30" value="[][Lys8,Arg10]" label="Labels used for labelling the samples" help="(-labels) [...] specifies the labels for a single sample. For example &lt;br&gt; &lt;br&gt;[][Lys8,Arg10]        ... SILAC &lt;br&gt;[][Lys4,Arg6][Lys8,Arg10]        ... triple-SILAC &lt;br&gt;[Dimethyl0][Dimethyl6]        ... Dimethyl &lt;br&gt;[Dimethyl0][Dimethyl4][Dimethyl8]        ... triple Dimethyl &lt;br&gt;[ICPL0][ICPL4][ICPL6][ICPL10]        ... ICPL">
@@ -115,5 +115,5 @@
   <help>Completes peptide multiplets and resolves conflicts within them.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_MultiplexResolver.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_MultiplexResolver.html</help>
 </tool>