Mercurial > repos > galaxyp > openms_openswathconfidencescoring
comparison tools_blacklist.txt @ 9:401b29d0f88c draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit ddf41e8bda1ba065f5cdec98e93dee8165ffc1b9"
| author | galaxyp |
|---|---|
| date | Thu, 27 Aug 2020 19:49:07 -0400 |
| parents | 22f0e925d711 |
| children | fa73919cc97e |
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| 8:3d24698daa6e | 9:401b29d0f88c |
|---|---|
| 1 OMSSAAdapter | 1 # seems not possible for 2.5 https://github.com/OpenMS/OpenMS/issues/4426 |
| 2 MyriMatchAdapter | 2 DigestorMotif |
| 3 PepNovoAdapter | 3 |
| 4 SeedListGenerator | 4 # deprecated https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/latest/html/UTILS_IDDecoyProbability.html |
| 5 SpecLibSearcher | 5 # https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/latest/html/a16242.html |
| 6 MapAlignerIdentification | 6 IDDecoyProbability |
| 7 MapAlignerPoseClustering | 7 |
| 8 MapAlignerSpectrum | 8 # personal communication with author V. Bafna: |
| 9 MapAlignerRTTransformer | 9 # "InsPect is no longer maintained as there are many better tools including MS-GF+" |
| 10 InspectAdapter | |
| 11 | |
| 12 # licence? see https://github.com/bioconda/bioconda-recipes/issues/18953 | |
| 13 #MSFraggerAdapter | |
| 14 | |
| 15 # seems currently unusable https://github.com/OpenMS/OpenMS/pull/4443 | |
| 16 OpenSwathDIAPreScoring | |
| 17 | |
| 18 # https://github.com/OpenMS/OpenMS/issues/4550#issuecomment-594065727 | |
| 19 ProteomicsLFQ | |
| 20 | |
| 21 # https://github.com/OpenMS/OpenMS/issues/4401 | |
| 22 InclusionExclusionListCreator | |
| 23 RTPredict | |
| 24 PTPredict |