comparison OpenSwathFileSplitter.xml @ 1:83f73d0386e0 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 9a14ed1f2d3c9abdfb080251b3419dd9e0c52a14

0:8ddc26f9e2a5

<?xml version='1.0' encoding='UTF-8'?>
<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
<!--Proposed Tool Section: []-->
<tool id="OpenSwathFileSplitter" name="OpenSwathFileSplitter" version="2.1.0">
  <description>Splits SWATH files into n files, each containing one window.</description>
  <macros>
    <token name="@EXECUTABLE@">OpenSwathFileSplitter</token>
    <import>macros.xml</import>
  </macros>

#end if
#end if
> $param_stdout
</command>
  <inputs>
    <param name="param_in" type="data" format="mzxml,mzml" multiple="true" optional="False" size="30" label="Input file (SWATH/DIA file)" help="(-in) ">
      <sanitizer>
        <valid initial="string.printable">
          <remove value="'"/>
          <remove value="&quot;"/>
        </valid>

      </param>
      <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/>
    </expand>
  </inputs>
  <outputs>
    <data name="param_stdout" format="text" label="Output from stdout"/>
  </outputs>
  <help>Splits SWATH files into n files, each containing one window.


For more information, visit </help>
</tool>

1:83f73d0386e0

<?xml version='1.0' encoding='UTF-8'?>
<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
<!--Proposed Tool Section: [Targeted Experiments]-->
<tool id="OpenSwathFileSplitter" name="OpenSwathFileSplitter" version="2.2.0.1">
  <description>Splits SWATH files into n files, each containing one window.</description>
  <macros>
    <token name="@EXECUTABLE@">OpenSwathFileSplitter</token>
    <import>macros.xml</import>
  </macros>

#end if
#end if
> $param_stdout
</command>
  <inputs>
    <param name="param_in" type="data" format="mzml,mzxml" multiple="true" optional="False" size="30" label="Input file (SWATH/DIA file)" help="(-in) ">
      <sanitizer>
        <valid initial="string.printable">
          <remove value="'"/>
          <remove value="&quot;"/>
        </valid>

      </param>
      <param name="param_force" display="radio" type="boolean" truevalue="-force" falsevalue="" checked="false" optional="True" label="Overwrite tool specific checks" help="(-force) "/>
    </expand>
  </inputs>
  <outputs>
    <data name="param_stdout" format="txt" label="Output from stdout"/>
  </outputs>
  <help>Splits SWATH files into n files, each containing one window.


For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_OpenSwathFileSplitter.html</help>
</tool>