# HG changeset patch # User galaxyp # Date 1515711507 18000 # Node ID 9127ab1bdbc58b2ad064f4cf6f8455a6ff1dc342 # Parent 28dc352e81fecfe842a713a9c09b3a8f3551441c planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 8a95bc868914fb41c7452907f73a9273b03286ab diff -r 28dc352e81fe -r 9127ab1bdbc5 readme.md --- a/readme.md Sat Oct 28 05:22:17 2017 -0400 +++ b/readme.md Thu Jan 11 17:58:27 2018 -0500 @@ -117,7 +117,14 @@ [...] ]]> ``` - + + * In Xtandem Converter and probably in others: + + ``` + #if str($param_missed_cleavages) != '': + ``` + This is because integers needs to be compared as string otherwise `0` becomes `false`. + * In `MetaProSIP.xml` add `R` as a requirement: ``` @@ -164,7 +171,8 @@ ``` - * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in Galaxy-stable and are therefore in `SKIP_TOOLS_FILES.txt`: + * These tools have multiple outputs (number of inputs = number of outputs) which is not yet supported in + by the automatic conversion step and are therefore in `SKIP_TOOLS_FILES.txt`: * SeedListGenerator * SpecLibSearcher * MapAlignerIdentification