Mercurial > repos > galaxyp > openms_precursorionselector
view OMSSAAdapter.patch @ 12:598f53ccd9b8 draft
"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit 2adf8edc3de4e1cd3b299b26abb14544d17d0636"
author | galaxyp |
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date | Fri, 06 Nov 2020 20:38:59 +0000 |
parents | faac17171cc2 |
children |
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--- OMSSAAdapter.xml 2020-06-16 15:51:40.315400730 +0200 +++ /tmp/OMSSAAdapter.xml 2020-06-16 15:50:23.536086074 +0200 @@ -22,6 +22,7 @@ mkdir database && ln -s '$database' 'database/${re.sub("[^\w\-_]", "_", $database.element_identifier)}.$gxy2omsext($database.ext)' && +makeblastdb -dbtype prot -in 'database/${re.sub("[^\w\-_]", "_", $database.element_identifier)}.$gxy2omsext($database.ext)' && ## Main program call set -o pipefail &&