diff PTModel.xml @ 7:88bd406e3b22 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5-dirty

--- a/PTModel.xml	Tue Mar 20 15:26:16 2018 -0400
+++ b/PTModel.xml	Fri May 17 10:24:30 2019 -0400
@@ -10,7 +10,7 @@
   <expand macro="references"/>
   <expand macro="stdio"/>
   <expand macro="requirements"/>
-  <command>PTModel
+  <command detect_errors="aggressive"><![CDATA[PTModel
 
 #if $param_in_positive:
   -in_positive $param_in_positive
@@ -117,7 +117,7 @@
   -force
 #end if
 #end if
-</command>
+]]></command>
   <inputs>
     <param name="param_in_positive" type="data" format="idxml" optional="False" label="input file with positive examples" help="(-in_positive) "/>
     <param name="param_in_negative" type="data" format="idxml" optional="False" label="input file with negative examples" help="(-in_negative) "/>
@@ -166,5 +166,5 @@
   <help>Trains a model for the prediction of proteotypic peptides from a training set.
 
 
-For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/TOPP_PTModel.html</help>
+For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/TOPP_PTModel.html</help>
 </tool>