Mercurial > repos > galaxyp > openms_qcexporter
comparison QCExporter.xml @ 7:bb52c480a74a draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5
author | galaxyp |
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date | Fri, 17 May 2019 04:49:51 -0400 |
parents | aa28cebc18fc |
children | 7e8a254ef96d |
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6:a56aaea020b6 | 7:bb52c480a74a |
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8 <import>macros.xml</import> | 8 <import>macros.xml</import> |
9 </macros> | 9 </macros> |
10 <expand macro="references"/> | 10 <expand macro="references"/> |
11 <expand macro="stdio"/> | 11 <expand macro="stdio"/> |
12 <expand macro="requirements"/> | 12 <expand macro="requirements"/> |
13 <command>QCExporter | 13 <command detect_errors="aggressive"><![CDATA[QCExporter |
14 | 14 |
15 #if $param_in: | 15 #if $param_in: |
16 -in $param_in | 16 -in $param_in |
17 #end if | 17 #end if |
18 | 18 |
35 #if $adv_opts.adv_opts_selector=='advanced': | 35 #if $adv_opts.adv_opts_selector=='advanced': |
36 #if $adv_opts.param_force: | 36 #if $adv_opts.param_force: |
37 -force | 37 -force |
38 #end if | 38 #end if |
39 #end if | 39 #end if |
40 </command> | 40 ]]></command> |
41 <inputs> | 41 <inputs> |
42 <param name="param_in" type="data" format="qcml" optional="False" label="Input qcml file" help="(-in) "/> | 42 <param name="param_in" type="data" format="qcml" optional="False" label="Input qcml file" help="(-in) "/> |
43 <repeat name="rep_param_names" min="0" title="param_names"> | 43 <repeat name="rep_param_names" min="0" title="param_names"> |
44 <param name="param_names" type="text" size="30" label="The name of the target runs or sets to be exported from" help="(-names) If empty, from all will be exported"> | 44 <param name="param_names" type="text" size="30" label="The name of the target runs or sets to be exported from" help="(-names) If empty, from all will be exported"> |
45 <sanitizer> | 45 <sanitizer> |
59 <data name="param_out_csv" format="tabular"/> | 59 <data name="param_out_csv" format="tabular"/> |
60 </outputs> | 60 </outputs> |
61 <help>Will extract several qp from several run/sets in a tabular format. | 61 <help>Will extract several qp from several run/sets in a tabular format. |
62 | 62 |
63 | 63 |
64 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCExporter.html</help> | 64 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_QCExporter.html</help> |
65 </tool> | 65 </tool> |