Mercurial > repos > galaxyp > openms_qcextractor
comparison QCExtractor.xml @ 7:0a6323c670c8 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/openms commit f608f41d45664d04d3124c6ebc791bf8a566b3c5-dirty
author | galaxyp |
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date | Fri, 17 May 2019 10:22:35 -0400 |
parents | 564fe41ff448 |
children | ef970936ce43 |
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6:7c948bbf859b | 7:0a6323c670c8 |
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8 <import>macros.xml</import> | 8 <import>macros.xml</import> |
9 </macros> | 9 </macros> |
10 <expand macro="references"/> | 10 <expand macro="references"/> |
11 <expand macro="stdio"/> | 11 <expand macro="stdio"/> |
12 <expand macro="requirements"/> | 12 <expand macro="requirements"/> |
13 <command>QCExtractor | 13 <command detect_errors="aggressive"><![CDATA[QCExtractor |
14 | 14 |
15 #if $param_in: | 15 #if $param_in: |
16 -in $param_in | 16 -in $param_in |
17 #end if | 17 #end if |
18 #if $param_qp: | 18 #if $param_qp: |
30 #if $adv_opts.adv_opts_selector=='advanced': | 30 #if $adv_opts.adv_opts_selector=='advanced': |
31 #if $adv_opts.param_force: | 31 #if $adv_opts.param_force: |
32 -force | 32 -force |
33 #end if | 33 #end if |
34 #end if | 34 #end if |
35 </command> | 35 ]]></command> |
36 <inputs> | 36 <inputs> |
37 <param name="param_in" type="data" format="qcml" optional="False" label="Input qcml file" help="(-in) "/> | 37 <param name="param_in" type="data" format="qcml" optional="False" label="Input qcml file" help="(-in) "/> |
38 <param name="param_qp" type="text" size="30" label="Target attachment qp" help="(-qp) "> | 38 <param name="param_qp" type="text" size="30" label="Target attachment qp" help="(-qp) "> |
39 <sanitizer> | 39 <sanitizer> |
40 <valid initial="string.printable"> | 40 <valid initial="string.printable"> |
60 <data name="param_out_csv" format="tabular"/> | 60 <data name="param_out_csv" format="tabular"/> |
61 </outputs> | 61 </outputs> |
62 <help>Extracts a table attachment to a given qc parameter. | 62 <help>Extracts a table attachment to a given qc parameter. |
63 | 63 |
64 | 64 |
65 For more information, visit http://ftp.mi.fu-berlin.de/OpenMS/release-documentation/html/UTILS_QCExtractor.html</help> | 65 For more information, visit https://abibuilder.informatik.uni-tuebingen.de/archive/openms/Documentation/release/2.3.0/html/UTILS_QCExtractor.html</help> |
66 </tool> | 66 </tool> |