Mercurial > repos > galaxyp > package_morpheus_255
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author | galaxyp |
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date | Mon, 23 May 2016 09:48:21 -0400 |
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<?xml version="1.0"?> <tool_dependency> <package name="mono" version="4.0"> <repository changeset_revision="4912e4d532cd" name="package_mono_4_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> </package> <package name="morpheus" version="255"> <install version="1.0"> <actions> <action type="download_by_url">https://github.com/cwenger/Morpheus/releases/download/r255/Morpheus_mzML_Mono.tar.gz</action> <action type="set_environment_for_install"> <repository changeset_revision="4912e4d532cd" name="package_mono_4_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> <package name="mono" version="4.0" /> </repository> </action> <action type="move_directory_files"> <source_directory>.</source_directory> <destination_directory>$INSTALL_DIR/</destination_directory> </action> <action type="set_environment"> <environment_variable action="set_to" name="MORPHEUS_PATH">$INSTALL_DIR</environment_variable> <environment_variable action="prepend_to" name="PATH">$ENV[MONO_ROOT_PATH]/bin</environment_variable> <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[MONO_ROOT_PATH]/lib</environment_variable> <environment_variable action="set_to" name="MONO_ROOT_PATH">$ENV[MONO_ROOT_PATH]</environment_variable> </action> </actions> </install> <readme> Install Galaxy package application for Morpheus release 255 for use on linux Must be executed with mono: mono ${MORPHEUS_PATH}/morpheus_mzml_mono_cl.exe -d input.mzML -db searchDB.fasta https://github.com/cwenger/Morpheus/ </readme> </package> </tool_dependency>