Mercurial > repos > galaxyp > package_peptideshaker_1_10
changeset 0:63441af662c0 draft default tip
planemo upload commit 6dcfe37e286523588aa2738599af8d3273290f28-dirty
| author | galaxyp |
|---|---|
| date | Tue, 10 May 2016 06:30:52 -0400 |
| parents | |
| children | |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 27 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Tue May 10 06:30:52 2016 -0400 @@ -0,0 +1,27 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="peptide_shaker" version="1.10"> + <install version="1.0"> + <actions> + <action type="download_by_url">http://genesis.ugent.be/maven2/eu/isas/peptideshaker/PeptideShaker/1.10.2/PeptideShaker-1.10.2.zip</action> + <action type="move_directory_files"> + <source_directory>../PeptideShaker-1.10.2</source_directory> + <destination_directory>$INSTALL_DIR/</destination_directory> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> + <environment_variable name="PEPTIDESHAKER_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable> + <environment_variable name="PEPTIDESHAKER_JAR_PATH" action="set_to">$INSTALL_DIR/PeptideShaker-1.10.2.jar</environment_variable> + </action> + </actions> + </install> + <readme> + Install Galaxy package application for PeptideShaker 1.10 + http://peptide-shaker.googlecode.com + + NOTE: Installation from Galaxy requires release v15.10 or later + or requires commits : + - https://github.com/galaxyproject/galaxy/commit/197c7b21b209a7b6fbdb9a8a11c232a2b88523fc#diff-f304e7b7451d47608f7ded8f2b9c16d2 + </readme> + </package> +</tool_dependency>