diff test-data/immunopeptidomics.mgf @ 0:24681d6372f3 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/pepquery2 commit 00e1b1770d0b1f9fe31384b37b55f7ae9d97b597

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/immunopeptidomics.mgf	Sun Nov 06 16:26:04 2022 +0000
@@ -0,0 +1,464 @@
+BEGIN IONS
+TITLE=controllerType=0 controllerNumber=1 scan=19846
+RTINSECONDS=2320.06458
+PEPMASS=383.529876708984
+CHARGE=3+
+84.0449677 46347.0703125
+84.0813446 85493.9453125
+86.0719299 7175.7060546875
+86.0969772 135316.21875
+87.0795746 57686.53515625
+89.5852509 6013.955078125
+91.0547638 26870.0390625
+100.0871506 10508.3408203125
+101.0712357 8028.2236328125
+102.0548477 7109.3364257813
+110.071434 72448.5390625
+112.0872192 68537.90625
+116.0708847 66026.75
+116.6829987 7043.2426757813
+119.0492325 28436.21484375
+120.0808487 28182.986328125
+123.0442657 6282.2768554688
+127.0979004 32528.88671875
+129.1026154 74929.3046875
+129.1124268 15517.341796875
+132.1023407 7616.8291015625
+136.075592 267654.46875
+137.0793915 44604.71484375
+140.0816498 8406.1591796875
+145.4732819 7887.0209960938
+147.0440521 10594.44921875
+147.1123962 10032.357421875
+155.0816803 6984.1274414063
+157.1085968 34948.90234375
+165.0540466 39318.01953125
+167.0815887 29707.244140625
+168.085022 6312.9848632813
+182.0816193 28942.546875
+183.1242371 7433.0512695313
+183.1487885 8203.357421875
+193.0978699 6826.6010742188
+195.0764313 23284.12109375
+195.1120148 9413.0185546875
+197.1287689 31395.33203125
+198.132309 9345.76953125
+199.7877808 5461.4345703125
+213.0883179 6907.8862304688
+217.1338043 13646.8583984375
+219.1365814 28881.201171875
+226.1663971 13425.7822265625
+244.165451 62294.3984375
+245.1695709 14033.3974609375
+249.673233 32895.77734375
+254.1607361 72503.140625
+255.1666107 6893.8310546875
+259.0739441 12570.2685546875
+260.0770569 6460.126953125
+271.1891785 9831.76953125
+275.1358337 11066.83984375
+304.6169434 9695.1650390625
+308.5368347 10936.181640625
+308.8744507 6715.9243164063
+311.181427 8423.06640625
+326.7102356 8839.98828125
+328.2081909 21860.5078125
+329.8709106 7965.8657226563
+330.2044983 8398.9033203125
+331.1609192 7686.9453125
+333.8371277 25565.46484375
+334.1699219 7952.1284179688
+339.8395081 31163.154296875
+340.1759949 26240.822265625
+340.6808167 36919.71484375
+342.1118774 7167.1025390625
+342.1811218 10171.65234375
+346.5349731 7574.7329101563
+347.7381592 9350.056640625
+348.4993286 7552.921875
+353.6708679 38643.10546875
+354.1769409 6889.3901367188
+354.2250671 21217.833984375
+361.6572571 6491.6513671875
+362.1836853 6020.7607421875
+363.1853333 8824.9462890625
+377.2033691 6569.89453125
+381.2067871 7040.6538085938
+383.2186279 68377.4609375
+383.3130188 116036.234375
+383.526886 42512.03125
+385.2560425 10095.142578125
+398.2119751 25488.392578125
+401.2857666 10739.900390625
+410.2869873 10938.7431640625
+417.2008667 6045.6533203125
+417.696991 8364.318359375
+418.2027893 8019.1762695313
+426.2158203 9391.662109375
+428.8858948 6009.2065429688
+431.206543 9535.4150390625
+451.2514343 6296.6337890625
+465.7139282 6659.9360351563
+466.2247925 8575.556640625
+475.2226257 6292.1694335938
+488.2868042 7346.7373046875
+489.2886047 30622.896484375
+491.2367249 8038.7392578125
+492.2262268 27380.2578125
+496.3111572 9502.2919921875
+498.3398438 83627.8203125
+499.348114 9477.421875
+502.2510376 7497.5302734375
+502.8083191 7691.1728515625
+518.2723389 29630.49609375
+519.2763672 13119.953125
+656.3309937 6904.6923828125
+673.3564453 8458.634765625
+END IONS
+BEGIN IONS
+TITLE=controllerType=0 controllerNumber=1 scan=19905
+RTINSECONDS=2325.98454
+PEPMASS=534.22802734375
+CHARGE=2+
+74.0607834 11525.5478515625
+80.820961 1134.3864746094
+84.0448685 11916.904296875
+84.0813599 24140.73046875
+86.0719757 1059.546875
+86.0969696 48334.11328125
+87.0556259 2711.1242675781
+87.0794067 2536.3103027344
+87.099884 1441.4647216797
+88.0397949 1339.0686035156
+89.0711365 5940.744140625
+95.5842514 960.4934692383
+100.0871887 1435.1180419922
+101.0711517 11117.935546875
+102.0551834 7843.828125
+104.0528793 2629.0866699219
+107.0505447 1256.6583251953
+107.47509 1007.3388061523
+110.0714264 24055.96484375
+112.087204 2137.0339355469
+115.0872574 2242.5446777344
+119.0812531 1181.8509521484
+120.0808029 19385.041015625
+127.0867386 5999.564453125
+129.065918 4383.1904296875
+129.1022491 33245.55859375
+130.0497742 1252.8232421875
+131.0811462 1228.9758300781
+136.0639343 1478.1802978516
+136.0756531 41457.83203125
+137.0790558 2168.0249023438
+141.0658417 2161.6188964844
+141.1025543 1396.7373046875
+145.0974884 1154.3653564453
+152.0713348 1227.7298583984
+155.0810394 2207.4116210938
+157.0602112 1539.4930419922
+157.08461 1485.4039306641
+157.1333466 2088.0070800781
+159.0758057 2233.6645507813
+159.1125183 1578.9256591797
+165.0541687 14583.548828125
+166.085968 18895.611328125
+169.1333466 10393.7421875
+171.0764618 1893.2116699219
+172.1085052 1334.9647216797
+180.0661316 2653.572265625
+182.0809937 32101.177734375
+183.076828 2454.3715820313
+183.1490936 1469.2236328125
+185.077774 2541.4504394531
+185.0941162 1574.8117675781
+185.1289368 1785.0300292969
+186.087677 2044.2495117188
+187.1076813 2141.6088867188
+198.0757141 1864.1412353516
+199.0702972 1590.9162597656
+200.10289 5724.33203125
+201.1239624 2084.2858886719
+203.0672455 1515.2619628906
+207.1134491 2512.40625
+213.0875549 1643.7739257813
+215.1399994 2060.5869140625
+216.0997772 1206.705078125
+216.1348419 1320.7780761719
+217.1352234 8159.3056640625
+220.1828613 3609.7250976563
+220.2030029 1611.9375
+221.1286774 11386.6640625
+223.1070251 5323.6176757813
+226.1182861 4679.68359375
+230.1152496 2067.7849121094
+235.1436768 2349.3061523438
+236.1468964 1393.5037841797
+237.1257629 2463.6643066406
+240.1340179 1668.9652099609
+245.13237 1704.8936767578
+247.1428375 1828.2724609375
+249.0960083 1496.8309326172
+249.1233063 1982.8770751953
+254.1599274 1287.4233398438
+262.6038818 2132.6999511719
+267.1069946 1409.6979980469
+267.1347351 4155.18359375
+270.1081848 2705.4152832031
+270.6130981 2401.3571777344
+271.1154175 1773.4208984375
+277.6126709 1322.0480957031
+283.1292419 6684.1733398438
+285.2037659 1555.5247802734
+290.6115112 1747.0528564453
+293.1127625 1832.3509521484
+295.0375366 1139.5216064453
+298.6217346 2137.7734375
+299.1255493 1164.4644775391
+299.6296692 5615.0180664063
+304.6210938 1524.0411376953
+313.6674805 1478.9112548828
+314.6342773 1185.4146728516
+341.1139832 1686.7280273438
+350.1498108 2248.2668457031
+350.6541443 9815.0107421875
+351.1555786 4738.2700195313
+351.6599426 1457.0270996094
+355.647583 1925.8502197266
+358.1459961 1697.1291503906
+364.1647644 2035.076171875
+364.6515198 2264.7180175781
+365.6571045 2539.4509277344
+366.1519775 1271.5914306641
+368.1899719 2488.8234863281
+370.1492615 1207.8226318359
+372.6609192 1450.5041503906
+373.1611023 15705.77734375
+373.6647339 6134.396484375
+376.5512695 1535.8891601563
+379.1600952 1519.6890869141
+379.6573486 1735.7387695313
+382.6697693 1877.0784912109
+384.6668396 1368.4975585938
+386.1818542 4932.7622070313
+388.0981445 1814.0821533203
+388.1616516 1639.3973388672
+391.6724243 1722.4331054688
+394.6583252 2745.8254394531
+395.1569519 1794.5734863281
+399.1826477 1813.751953125
+399.6832886 2202.8469238281
+400.1859131 27261.03515625
+400.6886902 11703.2177734375
+405.1769714 1845.1595458984
+406.1872559 5626.5249023438
+409.1769714 1553.7102050781
+410.2037659 9268.25390625
+410.7049255 2537.4650878906
+412.1827393 2462.1599121094
+415.1905518 4857.001953125
+417.1824646 2098.9926757813
+423.1886902 1632.6658935547
+428.6966248 5038.703125
+429.1943359 2628.6257324219
+430.1769409 2335.6350097656
+438.2408752 2383.4521484375
+439.1846313 18274.087890625
+439.6879578 7237.6088867188
+443.2449951 1595.5926513672
+445.186676 4973.349609375
+445.6867676 2095.1735839844
+446.1969604 1545.0024414063
+450.6947937 2427.0949707031
+452.2566528 1537.7886962891
+454.1917114 1963.4315185547
+458.1747131 1448.1218261719
+461.2607727 1722.7113037109
+465.6973877 1562.3093261719
+466.1947937 2171.53515625
+467.2056274 10621.619140625
+467.7023621 9091.3349609375
+468.1976929 1944.4018554688
+468.267395 4734.5639648438
+469.273468 1822.9508056641
+473.1994934 1352.2316894531
+473.6989746 1343.6881103516
+475.1999512 5885.4248046875
+475.7026672 6054.9418945313
+476.2094421 4897.3432617188
+476.7133789 1982.70703125
+478.2355347 5131.12109375
+481.1903992 2123.00390625
+481.7055664 2059.3818359375
+482.2129822 6752.0048828125
+482.7108459 2522.6437988281
+487.3049316 2514.1276855469
+490.7094421 2462.6801757813
+495.70578 5170.00390625
+501.7067566 1650.3034667969
+501.7937622 7237.1142578125
+502.296875 2418.212890625
+504.21698 9748.248046875
+504.7191772 6072.6821289063
+510.2188721 6962.052734375
+519.2223511 8869.3369140625
+519.7225342 4718.7387695313
+520.2103271 16541.169921875
+520.7109985 2730.8581542969
+524.7560425 1626.7911376953
+526.2027588 2263.7565917969
+526.7091675 1732.9114990234
+533.8047485 10959.140625
+534.2905273 10083.3759765625
+534.7897339 30336.474609375
+535.220459 1591.669921875
+539.1575928 2096.6694335938
+551.1583862 2616.3996582031
+569.1661377 2812.7487792969
+641.3411255 4872.2426757813
+643.3137207 1385.0288085938
+652.3312378 1978.6364746094
+668.3342896 1452.5230712891
+682.3339233 1898.4290771484
+683.3429565 1458.1762695313
+696.3226318 1923.4722900391
+784.5008545 6190.7158203125
+790.3800659 2451.6320800781
+819.3933716 4207.2880859375
+820.4173584 2018.9385986328
+824.4292603 11264.025390625
+869.4186401 2067.2492675781
+882.4277954 1771.7611083984
+884.423584 1570.5802001953
+885.4588623 2440.49609375
+955.4633789 7311.4379882813
+969.456604 2234.6115722656
+END IONS
+BEGIN IONS
+TITLE=controllerType=0 controllerNumber=1 scan=19944
+RTINSECONDS=2329.22502
+PEPMASS=516.783386230469
+CHARGE=2+
+72.0815811 27197.671875
+74.0610199 4197.1069335938
+84.0451736 15634.2109375
+84.0815887 26392.96875
+86.0969391 88900.34375
+87.0557785 6371.4975585938
+87.1004715 5257.353515625
+88.0400085 4621.7041015625
+101.0712738 5125.9956054688
+102.0554962 23467.248046875
+107.0487747 4362.7963867188
+110.0715256 339710.21875
+111.0756683 11064.5341796875
+112.0868912 4111.2602539063
+116.0706635 55538.3046875
+120.080925 26441.748046875
+127.0875549 4627.248046875
+129.102829 26702.419921875
+132.1021881 5254.7578125
+133.0611267 3728.3393554688
+136.0756378 91992.3203125
+137.0794525 4378.3774414063
+138.0666656 7507.4252929688
+145.5386963 6195.8090820313
+157.1097717 3760.1879882813
+159.0761414 3559.2092285156
+166.086441 5174.974609375
+169.0968933 6497.8017578125
+173.09198 66982.4140625
+180.113205 6698.7612304688
+181.0975647 20135.044921875
+182.081604 7997.3110351563
+183.1493378 16863.73046875
+197.1275787 6301.8452148438
+202.0863037 3530.7102050781
+208.1073456 25956.681640625
+209.0920258 14764.1796875
+218.0425568 28767.90234375
+229.1558533 5750.8208007813
+233.0927124 4071.7492675781
+235.1186981 36820.6640625
+243.1336212 24782.921875
+267.1106567 5503.90625
+278.1124878 4135.1215820313
+286.1757813 15374.74609375
+304.1647339 5803.3159179688
+306.0768738 3530.1059570313
+318.1595459 5520.9609375
+330.1925964 14000.76171875
+344.6773376 3574.6950683594
+356.2409973 12024.30078125
+360.2006531 46041.26171875
+360.7026062 19602.333984375
+363.6889648 16339.1533203125
+364.1605225 3471.5439453125
+365.1912537 6514.8598632813
+365.6857605 3434.3635253906
+372.6929016 23375.6328125
+374.1980286 240148.9375
+374.6990051 88531.46875
+377.6847839 18261.869140625
+378.1841431 4990.4458007813
+384.2341614 28763.40234375
+386.6903687 14500.7939453125
+398.2019958 16223.544921875
+416.7427673 8074.5288085938
+423.2320251 4371.8520507813
+425.1813965 4210.1938476563
+430.7402344 27642.935546875
+431.2440491 13417.583984375
+442.2075195 7980.6059570313
+442.2713928 4595.1391601563
+442.7108459 5553.3310546875
+448.2337952 8279.3447265625
+448.7311707 5624.8461914063
+451.2121582 8333.0185546875
+451.7119141 4570.4624023438
+457.7275391 17480.1015625
+459.2512817 48900.5546875
+459.7523804 29497.771484375
+460.2167053 5359.6381835938
+498.7574158 3551.4931640625
+499.2520752 4235.8666992188
+507.2600708 53245.89453125
+507.7609253 46670.12890625
+508.2612305 19332.828125
+516.2666626 4137.541015625
+516.7805176 58299.46875
+517.281189 36883.984375
+529.3075562 16754.47265625
+556.2666626 3977.314453125
+582.3347168 7930.2817382813
+599.2963867 5640.9077148438
+610.3297729 130150.6640625
+611.3359375 27716.517578125
+617.3026733 19406.369140625
+618.3014526 5174.8359375
+626.3168335 4723.9135742188
+635.3135986 17860.3515625
+636.3198853 4314.6948242188
+643.3532715 23298.431640625
+644.3613892 4250.1220703125
+667.2992554 8192.587890625
+685.3235474 3758.7578125
+719.3981934 13301.7373046875
+720.395752 4378.724609375
+729.3352051 7709.2412109375
+747.3901367 84267.8828125
+748.3964233 29535.37109375
+754.3642578 5714.333984375
+755.3690186 3943.5083007813
+764.3662109 6421.2250976563
+772.3707886 3762.69140625
+789.3843384 4607.880859375
+791.3812256 3588.5078125
+798.3960571 6360.8334960938
+806.4115601 30085.07421875
+832.4921875 4568.6284179688
+833.508728 4909.1865234375
+860.4714355 13005.275390625
+895.4536743 16561.779296875
+896.4584961 4322.0971679688
+END IONS