Mercurial > repos > galaxyp > peptideshaker
annotate test-data/peptide_shaker_peptides_phoshorylation_result2.tabular @ 34:0ebf3d3e4c90 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 5d191d65c509c913be62ec5b98328c7f36262fbc
| author | galaxyp |
|---|---|
| date | Thu, 16 Feb 2017 07:37:26 -0500 |
| parents | ad60446b1e93 |
| children |
| rev | line source |
|---|---|
|
30
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
1 Protein(s) Protein Group(s) #Validated Protein Group(s) Unique Database Sequence Modified Sequence AAs Before AAs After Variable Modifications Fixed Modifications Localization Confidence Confident Phosphosites #Confident Phosphosites Ambiguous Phosphosites #Ambiguous Phosphosites #Validated PSMs #PSMs Confidence [%] Validation |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
2 1 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 SVISIGEVESEGQYVTLENTSSGR NH2-SVISIGEVESEGQYVTLENTSSGR-COOH SK; SK; SK SK; SK; SK 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
3 2 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 YESQLSQIR NH2-YESQLSQIR-COOH AR; AR QS; QS 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
4 3 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 SHVVGAGLGGGSMGSMNQSMSLHGGR NH2-SHVVGAGLGGGSMGSMNQSMSLHGGR-COOH RR; RR AS; AS 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
5 4 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 EFDVEPLKEAYQAEIDEAK NH2-EFDVEPLKEAYQAEIDEAK-COOH RR; RR NL; NL 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
6 5 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 ISITTYEEEIEDLHATAR NH2-ISITTYEEEIEDLHATAR-COOH LK; LK IN; IN 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
7 6 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 ISTGYITENIGGFR NH2-ISTGYITENIGGFR-COOH NR; NR SE; SE 4 4 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
8 7 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 ASLGMAAGVAGGIATK NH2-ASLGMAAGVAGGIATK-COOH GR; GR DM; DM 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
9 8 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 LISATSISPEHK NH2-LISATSISPEHK-COOH DR; DR; DR ID; ID; ID 4 4 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
10 9 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 LHVEMESMIEELQMLMDAK NH2-LHVEMESMIEELQMLMDAK-COOH NK; NK LS; LS 4 4 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
11 10 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 NLLLDANKENGELK NH2-NLLLDANKENGELK-COOH AK; AK IS; IS 4 4 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
12 11 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 SLQAENEQLR NH2-SLQAENEQLR-COOH VR; VR LK; LK 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
13 12 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 KGDIIATVDEWGPVNR NH2-KGDIIATVDEWGPVNR-COOH AK; AK; AK NS; NS; NS 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
14 13 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 MEIITITNQLQR NH2-MEIITITNQLQR-COOH MK; MK SN; SN 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
15 14 cds.comp52727_c0_seq1; cds.comp52727_c0_seq2 cds.comp52727_c0_seq1, cds.comp52727_c0_seq2 (Doubtful) 1 1 EIRDEYDNQLNLLSADLESK NH2-EIRDEYDNQLNLLSADLESK-COOH MR; MR YQ; YQ 2 2 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
16 15 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 VGNLEEELEFLR NH2-VGNLEEELEFLR-COOH QK; QK SV; SV 4 4 100.0 Doubtful |
|
ad60446b1e93
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
galaxyp
parents:
21
diff
changeset
|
17 16 cds.comp41779_c0_seq1; cds.comp41779_c0_seq2 cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful) 1 1 INEDRIDELQDKVNK NH2-INEDRIDELQDKVNK-COOH AR; AR LI; LI 2 2 100.0 Doubtful |