Mercurial > repos > galaxyp > peptideshaker

annotate test-data/peptideshaker_reports_output_peptidesphosphorylation.tabular @ 57:da885ca16cb2 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 44a20633e04b2396fad4b568904a257769b2bbc1"
author galaxyp
date Tue, 16 Mar 2021 15:12:03 +0000
parents bb0130ff73ce
children
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bb0130ff73ce "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit f27e376ff604cd8faf57c63f25ddcfd61ca9db6a"
galaxyp
parents:
diff changeset
1 Protein(s) Protein Group(s) #Validated Protein Group(s) Unique Protein Group Sequence Modified Sequence AAs Before AAs After Variable Modifications Fixed Modifications Localization Confidence Confident Phosphosites #Confident Phosphosites Ambiguous Phosphosites #Ambiguous Phosphosites #PSMs #Validated PSMs Confidence [%] Validation
bb0130ff73ce "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit f27e376ff604cd8faf57c63f25ddcfd61ca9db6a"
galaxyp
parents:
diff changeset
2 1 cds.comp41890_c0_seq1 cds.comp41890_c0_seq1 (Doubtful) 1 1 PGGFAKVWANGMGDPNSGDLVWHNKSR NH2-PGGFAKVWANGMGDPNSGDLVWHNKSR-COOH LK LG 1 1 100.0 Confident
bb0130ff73ce "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit f27e376ff604cd8faf57c63f25ddcfd61ca9db6a"
galaxyp
parents:
diff changeset
3 2 cds.comp8310_c0_seq2 cds.comp8310_c0_seq2 (Doubtful) 1 1 NLVAEESMNMLKNK NH2-NLVAEESMNMLKNK-COOH NR FK 1 1 100.0 Confident
bb0130ff73ce "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit f27e376ff604cd8faf57c63f25ddcfd61ca9db6a"
galaxyp
parents:
diff changeset
4 3 cds.comp41890_c0_seq1_REVERSED cds.comp41890_c0_seq1_REVERSED (Doubtful) 1 1 RYTSHEQLEGK NH2-RYTSHEQLEGK-COOH NK VL 1 1 100.0 Confident
bb0130ff73ce "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit f27e376ff604cd8faf57c63f25ddcfd61ca9db6a"
galaxyp
parents:
diff changeset
5 4 cds.comp41779_c0_seq1,cds.comp41779_c0_seq2,cds.comp41779_c0_seq3 cds.comp41779_c0_seq1,cds.comp41779_c0_seq2,cds.comp41779_c0_seq3 (Doubtful) 1 1 LDRLISATSISPEHKIDFLFK NH2-LDRLISATSISPEHKIDFLFK-COOH WK;WK;WK DP;DP;DP 1 1 100.0 Confident