Mercurial > repos > galaxyp > peptideshaker
comparison tool_dependencies.xml @ 4:733c4ee877a4 draft
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author | galaxyp |
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date | Mon, 24 Jun 2013 12:39:12 -0400 |
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children | 186c754d47a4 |
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3:679a4b0041a4 | 4:733c4ee877a4 |
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1 <?xml version="1.0"?> | |
2 <tool_dependency> | |
3 <package name="SearchGUI" version="1.13.1"> | |
4 <install version="1.0"> | |
5 <actions> | |
6 <action type="download_by_url">http://searchgui.googlecode.com/files/SearchGUI-1.13.1_mac_and_linux.zip</action> | |
7 <action type="shell_command">tar -xf SearchGUI-1.13.1_mac_and_linux.tar</action> | |
8 <action type="shell_command">cd SearchGUI-1.13.1_mac_and_linux</action> | |
9 <action type="shell_command">chmod -R o+w resources</action> | |
10 <action type="move_directory_files"> | |
11 <source_directory>.</source_directory> | |
12 <destination_directory>$INSTALL_DIR/</destination_directory> | |
13 </action> | |
14 <action type="shell_command">mkdir -p $BIN_DIR</action> | |
15 <action type="set_environment"> | |
16 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | |
17 </action> | |
18 </actions> | |
19 </install> | |
20 <readme> | |
21 This package downloads and installs the SearchGUI scripts develped as part of the Peptideshaker tool. | |
22 (https://github.com/jmchilton/peptide-shaker). | |
23 | |
24 </readme> | |
25 </package> | |
26 | |
27 <package name="PeptideShaker" version="0.20.1"> | |
28 <install version="1.0"> | |
29 <actions> | |
30 <action type="download_by_url">http://peptide-shaker.googlecode.com/files/PeptideShaker-0.20.1.zip</action> | |
31 <action type="shell_command">chmod -R o+w resources</action> | |
32 <action type="move_directory_files"> | |
33 <source_directory>.</source_directory> | |
34 <destination_directory>$INSTALL_DIR/</destination_directory> | |
35 </action> | |
36 <action type="shell_command">mkdir -p $BIN_DIR</action> | |
37 <action type="set_environment"> | |
38 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> | |
39 </action> | |
40 </actions> | |
41 </install> | |
42 <readme> | |
43 This package downloads and installs the peptideshaker tool as a part of the peptideshaker framework. | |
44 (https://github.com/jmchilton/peptide-shaker). | |
45 | |
46 </readme> | |
47 </package> | |
48 </tool_dependency> |