Mercurial > repos > galaxyp > peptideshaker

diff test-data/peptideshaker_reports_output_proteins.tabular @ 58:07ff622ec007 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 0f6ab8b5647a33b2b051d7aa808ef42546436b23"
author galaxyp
date Sat, 10 Apr 2021 15:57:17 +0000
parents bb0130ff73ce
children
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--- a/test-data/peptideshaker_reports_output_proteins.tabular	Tue Mar 16 15:12:03 2021 +0000
+++ b/test-data/peptideshaker_reports_output_proteins.tabular	Sat Apr 10 15:57:17 2021 +0000
@@ -1,5 +1,5 @@
-	Protein Inference	Main Accession	Description	Protein Group	Secondary Accessions	Chromosome	Gene Name	Taxonomy	Validated Coverage [%]	All Coverage [%]	Possible Coverage [%]	#Peptides	#Validated Peptides	#Unique Peptides	#Validated Unique Peptides	#PSMs	#Validated PSMs	Confidently Localized Modification Sites	#Confidently Localized Modification Sites	Ambiguously Localized Modification Sites	#Ambiguously Localized Modification Sites	Spectrum Counting	MW [kDa]	Confidence [%]	Validation
-1	Single Protein	cds.comp8310_c0_seq2	m.1138 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 22.01 EValue:2.0e-16	cds.comp8310_c0_seq2					3.69	3.69	81.0	1	1	1	1	1	1					12239.035185720222	45.26545451338222	100.0	Doubtful
-2	Single Protein	cds.comp41890_c0_seq1	m.9546 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 38.58 EValue:4.0e-20	cds.comp41890_c0_seq1					20.15	20.15	91.04	1	1	1	1	1	1					30798.227885377935	14.802380493830709	100.0	Doubtful
-3	Related Proteins	cds.comp41779_c0_seq1	m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67	cds.comp41779_c0_seq1,cds.comp41779_c0_seq2,cds.comp41779_c0_seq3	cds.comp41779_c0_seq2,cds.comp41779_c0_seq3				3.34	3.34	78.82	1	1	1	1	1	1					7590.674347507289	69.88215380565931	100.0	Doubtful
-4	Single Protein	cds.comp41890_c0_seq1_REVERSED	m.9546 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 38.58 EValue:4.0e-20-REVERSED	cds.comp41890_c0_seq1_REVERSED					8.21	8.21	90.3	1	1	1	1	1	1					31052.758694348	14.802380493830709	100.0	Doubtful
+	Protein Inference	Main Accession	Description	Protein Group	Secondary Accessions	Chromosome	Gene Name	Taxonomy	Organism Identifier	Validated Coverage [%]	All Coverage [%]	Possible Coverage [%]	#Peptides	#Validated Peptides	#Unique Peptides	#Validated Unique Peptides	#PSMs	#Validated PSMs	Confidently Localized Modification Sites	#Confidently Localized Modification Sites	Ambiguously Localized Modification Sites	#Ambiguously Localized Modification Sites	Spectrum Counting	MW [kDa]	Confidence [%]	Validation
+1	Single Protein	cds.comp8310_c0_seq2	m.1138 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 22.01 EValue:2.0e-16	cds.comp8310_c0_seq2						3.69	3.69	81.0	1	1	1	1	1	1					12239.035185720222	45.26545451338222	100.0	Doubtful
+2	Single Protein	cds.comp41890_c0_seq1	m.9546 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 38.58 EValue:4.0e-20	cds.comp41890_c0_seq1						20.15	20.15	91.04	1	1	1	1	1	1					30798.227885377935	14.802380493830709	100.0	Doubtful
+3	Related Proteins	cds.comp41779_c0_seq1	m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67	cds.comp41779_c0_seq1,cds.comp41779_c0_seq2,cds.comp41779_c0_seq3	cds.comp41779_c0_seq2,cds.comp41779_c0_seq3					3.34	3.34	78.82	1	1	1	1	1	1					7590.674347507289	69.88215380565931	100.0	Doubtful
+4	Single Protein	cds.comp41890_c0_seq1_REVERSED	m.9546 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 38.58 EValue:4.0e-20-REVERSED	cds.comp41890_c0_seq1_REVERSED						8.21	8.21	90.3	1	1	1	1	1	1					31052.758694348	14.802380493830709	100.0	Doubtful