diff README.rst @ 24:815f93bb3e1b draft

Uploaded

--- a/README.rst	Mon Aug 10 18:25:37 2015 -0400
+++ b/README.rst	Fri Nov 06 15:33:34 2015 -0500
@@ -42,6 +42,8 @@
 Note
 ----
 
+- Requires Galaxy release v15.10 or later, which fixes the installation of package_peptideshaker_1_1 and provides a searchgui_archive datatype that includes a version
+
 - PeptideShaker may require xvfb to simulate an X environment if this is installed on a headless server.
 
 See:
@@ -50,6 +52,14 @@
 * <https://code.google.com/p/searchgui/>
 
 
+Search GUI - Fixed and Variable Modifications
+-------------------------------------------
+
+ - Options for modifications are read from local data file: searchgui_mods.loc
+   This is copied from searchgui_mods.loc.sample on the first installation.  
+
+The modifications are from:  https://github.com/compomics/compomics-utilities/blob/master/src/main/java/com/compomics/util/experiment/identification/search_parameters_cli/IdentificationParametersInputBean.java
+
 GalaxyP Community
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