Mercurial > repos > galaxyp > peptideshaker

diff test-data/peptide_shaker_proteins_result2.tabular @ 30:ad60446b1e93 draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit bdb5ee12705a3494eee96d1963f16f68bbe41d5c
author galaxyp
date Fri, 13 Jan 2017 14:15:42 -0500
parents dfaea053e32f
children
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--- a/test-data/peptide_shaker_proteins_result2.tabular	Fri Jun 10 09:58:03 2016 -0400
+++ b/test-data/peptide_shaker_proteins_result2.tabular	Fri Jan 13 14:15:42 2017 -0500
@@ -1,3 +1,3 @@
-	Main Accession	Description	Gene Name	Chromosome	MW [kDa]	Possible Coverage [%]	Coverage [%]	Spectrum Counting NSAF 	Confidently Localized Modification Sites	# Confidently Localized Modification Sites	Ambiguously Localized Modification Sites	#Ambiguously Localized Modification Sites	PI	Secondary Accessions	Protein Group	#Validated Peptides	#Peptides	#Unique	#Validated PSMs	#PSMs	Confidence	Decoy	Validation
-1	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67				69.88215372568374	92.52	37.58	0.01785479771710408					Related Proteins	cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	cds.comp41779_c0_seq1|m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67, cds.comp41779_c0_seq2|m.9432 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.75 EValue:3.0e-67	15	15	15	40	40	100.0	0	Doubtful
-2	cds.comp52727_c0_seq1|m.18670 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 34.52 EValue:1.0e-91				69.9696370486838	100.0	3.25	0.0032520325203252032					Related Proteins	cds.comp52727_c0_seq2|m.18672 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 35.0 EValue:3.0e-92	cds.comp52727_c0_seq1|m.18670 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 34.52 EValue:1.0e-91, cds.comp52727_c0_seq2|m.18672 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 35.0 EValue:3.0e-92	1	1	1	2	2	100.0	0	Doubtful
+	Main Accession	Description	Gene Name	Chromosome	MW [kDa]	Possible Coverage [%]	Coverage [%]	Spectrum Counting	Confidently Localized Modification Sites	# Confidently Localized Modification Sites	Ambiguously Localized Modification Sites	#Ambiguously Localized Modification Sites	Protein Inference	Secondary Accessions	Protein Group	#Validated Peptides	#Peptides	#Unique	#Validated Unique	#Unique to Group	#Validated Unique to Group	#Validated PSMs	#PSMs	Confidence [%]	Validation
+1	cds.comp41779_c0_seq1	m.9429 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 30.62 EValue:7.0e-67			69.88215380565927	92.52	37.58	24162.449974467898					Related Proteins	cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2	15	15	15	15	15	15	40	40	100.0	Doubtful
+2	cds.comp52727_c0_seq1	m.18670 RecName: Full=70 kDa neurofilament protein; 1051067 GO:0005882 GO:0005198 Identity: 34.52 EValue:1.0e-91			69.96963713242043	100.0	3.25	4451.587393160344					Related Proteins	cds.comp52727_c0_seq2	cds.comp52727_c0_seq1, cds.comp52727_c0_seq2	1	1	1	1	1	1	2	2	100.0	Doubtful