Mercurial > repos > galaxyp > peptideshaker

diff test-data/peptideshaker_reports_output_peptides.tabular @ 55:bb0130ff73ce draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit f27e376ff604cd8faf57c63f25ddcfd61ca9db6a"
author galaxyp
date Fri, 15 Jan 2021 14:06:27 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/peptideshaker_reports_output_peptides.tabular	Fri Jan 15 14:06:27 2021 +0000
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+	Protein(s)	Protein Group(s)	#Validated Protein Group(s)	Unique Protein Group	Sequence	Modified Sequence	Position	AAs Before	AAs After	Variable Modifications	Fixed Modifications	Localization Confidence	#PSMs	#Validated PSMs	Confidence [%]	Validation
+1	cds.comp41890_c0_seq1	cds.comp41890_c0_seq1 (Doubtful)	1	1	PGGFAKVWANGMGDPNSGDLVWHNKSR	NH2-PGGFAKVWANGMGDPNSGDLVWHNKSR-COOH	cds.comp41890_c0_seq1 (78)	LK	LG				1	1	100.0	Confident
+2	cds.comp8310_c0_seq2	cds.comp8310_c0_seq2 (Doubtful)	1	1	NLVAEESMNMLKNK	NH2-NLVAEESMNMLKNK-COOH	cds.comp8310_c0_seq2 (264)	NR	FK				1	1	100.0	Confident
+3	cds.comp41890_c0_seq1_REVERSED	cds.comp41890_c0_seq1_REVERSED (Doubtful)	1	1	RYTSHEQLEGK	NH2-RYTSHEQLEGK-COOH	cds.comp41890_c0_seq1_REVERSED (115)	NK	VL				1	1	100.0	Confident
+4	cds.comp41779_c0_seq1,cds.comp41779_c0_seq2,cds.comp41779_c0_seq3	cds.comp41779_c0_seq1,cds.comp41779_c0_seq2,cds.comp41779_c0_seq3 (Doubtful)	1	1	LDRLISATSISPEHKIDFLFK	NH2-LDRLISATSISPEHKIDFLFK-COOH	cds.comp41779_c0_seq1 (546);cds.comp41779_c0_seq2 (539);cds.comp41779_c0_seq3 (64)	WK;WK;WK	DP;DP;DP				1	1	100.0	Confident