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view test-data/peptide_shaker_peptides_phoshorylation_result2.tabular @ 45:5fa8b409599e draft

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planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 62699d7e79ddbe3374ed28dfeb9002e8efa4c544
author galaxyp
date Mon, 30 Apr 2018 04:41:50 -0400
parents ad60446b1e93
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	Protein(s)	Protein Group(s)	#Validated Protein Group(s)	Unique Database	Sequence	Modified Sequence	AAs Before	AAs After	Variable Modifications	Fixed Modifications	Localization Confidence	Confident Phosphosites	#Confident Phosphosites	Ambiguous Phosphosites	#Ambiguous Phosphosites	#Validated PSMs	#PSMs	Confidence [%]	Validation
1	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	SVISIGEVESEGQYVTLENTSSGR	NH2-SVISIGEVESEGQYVTLENTSSGR-COOH	SK; SK; SK	SK; SK; SK								2	2	100.0	Doubtful
2	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	YESQLSQIR	NH2-YESQLSQIR-COOH	AR; AR	QS; QS								2	2	100.0	Doubtful
3	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	SHVVGAGLGGGSMGSMNQSMSLHGGR	NH2-SHVVGAGLGGGSMGSMNQSMSLHGGR-COOH	RR; RR	AS; AS								2	2	100.0	Doubtful
4	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	EFDVEPLKEAYQAEIDEAK	NH2-EFDVEPLKEAYQAEIDEAK-COOH	RR; RR	NL; NL								2	2	100.0	Doubtful
5	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	ISITTYEEEIEDLHATAR	NH2-ISITTYEEEIEDLHATAR-COOH	LK; LK	IN; IN								2	2	100.0	Doubtful
6	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	ISTGYITENIGGFR	NH2-ISTGYITENIGGFR-COOH	NR; NR	SE; SE								4	4	100.0	Doubtful
7	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	ASLGMAAGVAGGIATK	NH2-ASLGMAAGVAGGIATK-COOH	GR; GR	DM; DM								2	2	100.0	Doubtful
8	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	LISATSISPEHK	NH2-LISATSISPEHK-COOH	DR; DR; DR	ID; ID; ID								4	4	100.0	Doubtful
9	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	LHVEMESMIEELQMLMDAK	NH2-LHVEMESMIEELQMLMDAK-COOH	NK; NK	LS; LS								4	4	100.0	Doubtful
10	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	NLLLDANKENGELK	NH2-NLLLDANKENGELK-COOH	AK; AK	IS; IS								4	4	100.0	Doubtful
11	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	SLQAENEQLR	NH2-SLQAENEQLR-COOH	VR; VR	LK; LK								2	2	100.0	Doubtful
12	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2; cds.comp41779_c0_seq3	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	KGDIIATVDEWGPVNR	NH2-KGDIIATVDEWGPVNR-COOH	AK; AK; AK	NS; NS; NS								2	2	100.0	Doubtful
13	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	MEIITITNQLQR	NH2-MEIITITNQLQR-COOH	MK; MK	SN; SN								2	2	100.0	Doubtful
14	cds.comp52727_c0_seq1; cds.comp52727_c0_seq2	cds.comp52727_c0_seq1, cds.comp52727_c0_seq2 (Doubtful)	1	1	EIRDEYDNQLNLLSADLESK	NH2-EIRDEYDNQLNLLSADLESK-COOH	MR; MR	YQ; YQ								2	2	100.0	Doubtful
15	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	VGNLEEELEFLR	NH2-VGNLEEELEFLR-COOH	QK; QK	SV; SV								4	4	100.0	Doubtful
16	cds.comp41779_c0_seq1; cds.comp41779_c0_seq2	cds.comp41779_c0_seq1, cds.comp41779_c0_seq2 (Doubtful)	1	1	INEDRIDELQDKVNK	NH2-INEDRIDELQDKVNK-COOH	AR; AR	LI; LI								2	2	100.0	Doubtful