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added file dependencies

methylation of k
oxidation of m
carboxymethyl c
carbamidomethyl c
deamidation of n and q
propionamide c
phosphorylation of s
phosphorylation of t
phosphorylation of y
m cleavage from protein n-term
acetylation of protein n-term
methylation of protein n-term
tri-methylation of protein n-term
beta methythiolation of d
methylation of q
tri-methylation of k
methylation of d
methylation of e
methylation of peptide c-term
tri-deuteromethylation of d
tri-deuteromethylation of e
tri-deuteromethylation of peptide c-term
n-formyl met addition
2-amino-3-oxo-butanoic acid t
acetylation of k
amidation of peptide c-term
beta-methylthiolation of d (duplicate of 13)
carboxyamidomethylation of k
carboxyamidomethylation of h
carboxyamidomethylation of d
carboxyamidomethylation of e
carbamylation of k
carbamylation of n-term peptide
citrullination of r
oxidation of c to cysteic acid
di-iodination of y
di-methylation of k
di-methylation of r
di-methylation of peptide n-term
oxidation of f to dihydroxyphenylalanine
gammathiopropionylation of k
gammathiopropionylation of peptide n-term
farnesylation of c
formylation of k
formylation of peptide n-term
oxidation of w to formylkynurenin
fluorophenylalanine
beta-carboxylation of d
gamma-carboxylation of e
geranyl-geranyl
glucuronylation of protein n-term
glutathione disulfide
ubiquitinylation residue
guanidination of k
oxidation of h to n
oxidation of h to d
homoserine
homoserine lactone
oxidation of w to hydroxykynurenin
hydroxylation of d
hydroxylation of k
hydroxylation of n
hydroxylation of p
hydroxylation of f
hydroxylation of y
iodination of y
oxidation of w to kynurenin
lipoyl k
methyl ester of peptide c-term (duplicate of 18)
methyl ester of d
methyl ester of e (duplicate of 17)
methyl ester of s
methyl ester of y
methyl c
methyl h
methyl n
methylation of peptide n-term
methyl r
myristoleylation of g
myristoyl-4h of g
myristoylation of peptide n-term g
myristoylation of k
formylation of protein n-term
nem c
nipcam
oxidation of w to nitro
oxidation of y to nitro
o18 on peptide n-term
di-o18 on peptide n-term
oxidation of h
oxidation of w
phosphopantetheine s
palmitoylation of c
palmitoylation of k
palmitoylation of s
palmitoylation of t
phosphorylation of s with prompt loss
phosphorylation of t with prompt loss
phosphorylation with prompt loss on y
phosphorylation with neutral loss on c
phosphorylation with neutral loss on d
phosphorylation with neutral loss on h
propionyl light k
propionyl light on peptide n-term
propionyl heavy k
propionyl heavy peptide n-term
pyridyl k
pyridyl peptide n-term
pyro-cmc
pyro-glu from n-term e
pyro-glu from n-term q
oxidation of p to pyroglutamic acid
s-pyridylethylation of c
semet
sulfation of y
sulphone of m
tri-iodination of y
tri-methylation of r
n-acyl diglyceride cysteine
icat light
icat heavy
camthiopropanoyl k
phosphorylation with neutral loss on s
phosphorylation with neutral loss on t
phosphorylation of s with etd loss
phosphorylation of t with etd loss
heavy arginine-13c6
heavy arginine-13c6-15n4
heavy lysine-13c6
pngasf in o18 water
beta elimination of s
beta elimination of t
oxidation of c to sulfinic acid
arginine to ornithine
dehydro of s and t
carboxykynurenin of w
sumoylation of k
itraq114 on nterm
itraq114 on k
itraq114 on y
itraq115 on nterm
itraq115 on k
itraq115 on y
itraq116 on nterm
itraq116 on k
itraq116 on y
itraq117 on nterm
itraq117 on k
itraq117 on y
mmts on c
heavy lysine - 2h4
heavy lysine - 13c6 15n2
asparagine hexnac
asparagine dhexhexnac
serine hexnac
threonine hexnac
palmitoleyl of s
palmitoleyl of c
palmitoleyl of t
chd2-di-methylation of k
chd2-di-methylation of peptide n-term
maleimide-peo2-biotin of c
phosphorylation of h
oxidation of c
oxidation of y (duplicate of 64)
uniblue a on k
deamidation of n
trideuteration of l (silac)
tmt duplex on k
tmt duplex on n-term peptide
tmt 6-plex on k
tmt 6-plex on n-term peptide
itraq8plex:13c(7)15n(1) on nterm
itraq8plex:13c(7)15n(1) on k
itraq8plex:13c(7)15n(1) on y
itraq8plex:13c(6)15n(2) on nterm
itraq8plex:13c(6)15n(2) on k
itraq8plex:13c(6)15n(2) on y
selenocysteine
carboxymethylated selenocysteine
dimethyl 2d n-terminus
dimethyl 2d k
gtp desthiobiotinc12
gtp desthiobiotinc13
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