# HG changeset patch
# User galaxyp
# Date 1465405547 14400
# Node ID 432140bcc7fe09353425c5959a89a0cd1de2b6f5
# Parent  70dade9fb8e38a6e360c526879e57f914640805f
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/peptideshaker commit 450e533463b5e16e694dff6a5f6e97698c9d0521-dirty

diff -r 70dade9fb8e3 -r 432140bcc7fe peptide_shaker.xml
--- a/peptide_shaker.xml	Fri May 20 14:06:55 2016 -0400
+++ b/peptide_shaker.xml	Wed Jun 08 13:05:47 2016 -0400
@@ -170,7 +170,6 @@
             <options options_filter_attribute="metadata.searchgui_major_version" >
                 <filter type="add_value" value="@SEARCHGUI_MAJOR_VERSION@" />
             </options>
-            <validator type="expression" message="This version of PeptideShaker will only work with SearchGUI version: @SEARCHGUI_MAJOR_VERSION@ .">value is not None and value.metadata.searchgui_major_version == "@SEARCHGUI_MAJOR_VERSION@"</validator>
         </param>
 
         <conditional name="species_type">
diff -r 70dade9fb8e3 -r 432140bcc7fe searchgui.xml
--- a/searchgui.xml	Fri May 20 14:06:55 2016 -0400
+++ b/searchgui.xml	Wed Jun 08 13:05:47 2016 -0400
@@ -97,7 +97,7 @@
                 -omssa_estimate_charge ${omssa.estimate_charge}
 
                 -omssa_memory ${omssa.omssa_memory}
-                -omssa_isotopes ${omssa.omssa_isotopes} 
+                ## -omssa_isotopes ${omssa.omssa_isotopes} 
                 -omssa_neutron ${omssa.omssa_neutron} 
                 -omssa_low_intensity "${omssa.omssa_low_intensity}" 
                 -omssa_high_intensity ${omssa.omssa_high_intensity}