comparison nested_collection.py @ 2:7a0951d0e13e draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/percolator commit 4ca7fcd1587c906db3314048a223d23b63b3f038

1:86770eea5b09

    parser.add_argument('--pool-ids', dest='poolids', nargs='+', default=False)
    args = parser.parse_args()
    for batchcount, (pool_id, batch) in enumerate(get_batches_of_galaxyfiles(
            args.realnames, args.batchsize, args.poolids)):
        for fncount, batchfile in enumerate([args.galaxyfiles[index] for index in batch]):
            dsetname = '{}___batch{}_inputfn{}.mzid'.format(pool_id, batchcount, fncount)
            print('producing', dsetname)
            os.symlink(batchfile, dsetname)

if __name__ == '__main__':
    main()

2:7a0951d0e13e

    parser.add_argument('--pool-ids', dest='poolids', nargs='+', default=False)
    args = parser.parse_args()
    for batchcount, (pool_id, batch) in enumerate(get_batches_of_galaxyfiles(
            args.realnames, args.batchsize, args.poolids)):
        for fncount, batchfile in enumerate([args.galaxyfiles[index] for index in batch]):
            dsetname = '{}_batch{}___inputfn{}.mzid'.format(pool_id, batchcount, fncount)
            print('producing', dsetname)
            os.symlink(batchfile, dsetname)

if __name__ == '__main__':
    main()