Mercurial > repos > galaxyp > percolator
comparison test-data/target_ds3_withperco.mzid @ 2:7a0951d0e13e draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/percolator commit 4ca7fcd1587c906db3314048a223d23b63b3f038
| author | galaxyp |
|---|---|
| date | Fri, 10 Mar 2017 03:20:52 -0500 |
| parents | 86770eea5b09 |
| children |
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| 1:86770eea5b09 | 2:7a0951d0e13e |
|---|---|
| 123 <userParam value="4.7648582" name="StdevErrorTop7"/> | 123 <userParam value="4.7648582" name="StdevErrorTop7"/> |
| 124 <userParam value="0.79569435" name="MeanRelErrorAll"/> | 124 <userParam value="0.79569435" name="MeanRelErrorAll"/> |
| 125 <userParam value="9.273238" name="StdevRelErrorAll"/> | 125 <userParam value="9.273238" name="StdevRelErrorAll"/> |
| 126 <userParam value="0.79569435" name="MeanRelErrorTop7"/> | 126 <userParam value="0.79569435" name="MeanRelErrorTop7"/> |
| 127 <userParam value="9.273238" name="StdevRelErrorTop7"/> | 127 <userParam value="9.273238" name="StdevRelErrorTop7"/> |
| 128 <userParam name="percolator:score" value="-0.996"/> | |
| 129 <userParam name="percolator:psm_p_value" value="0.000e+00"/> | |
| 130 <userParam name="percolator:psm_q_value" value="1.000e+00"/> | |
| 131 <userParam name="percolator:psm_pep" value="1.000e+00"/> | |
| 132 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> | |
| 133 <userParam name="percolator:peptide_pep" value="1.000e+00"/> | |
| 128 </SpectrumIdentificationItem> | 134 </SpectrumIdentificationItem> |
| 129 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9576" name="scan number(s)"/> | 135 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9576" name="scan number(s)"/> |
| 130 </SpectrumIdentificationResult> | 136 </SpectrumIdentificationResult> |
| 131 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9739" id="SIR_240"> | 137 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9739" id="SIR_240"> |
| 132 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep363" calculatedMassToCharge="1044.435546875" experimentalMassToCharge="1045.4466552734375" chargeState="2" id="SII_240_1"> | 138 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep363" calculatedMassToCharge="1044.435546875" experimentalMassToCharge="1045.4466552734375" chargeState="2" id="SII_240_1"> |
| 184 <userParam value="2.0159998" name="StdevErrorTop7"/> | 190 <userParam value="2.0159998" name="StdevErrorTop7"/> |
| 185 <userParam value="-12.467069" name="MeanRelErrorAll"/> | 191 <userParam value="-12.467069" name="MeanRelErrorAll"/> |
| 186 <userParam value="2.0159998" name="StdevRelErrorAll"/> | 192 <userParam value="2.0159998" name="StdevRelErrorAll"/> |
| 187 <userParam value="-12.467069" name="MeanRelErrorTop7"/> | 193 <userParam value="-12.467069" name="MeanRelErrorTop7"/> |
| 188 <userParam value="2.0159998" name="StdevRelErrorTop7"/> | 194 <userParam value="2.0159998" name="StdevRelErrorTop7"/> |
| 195 <userParam name="percolator:score" value="-1.105"/> | |
| 196 <userParam name="percolator:psm_p_value" value="0.000e+00"/> | |
| 197 <userParam name="percolator:psm_q_value" value="1.000e+00"/> | |
| 198 <userParam name="percolator:psm_pep" value="1.000e+00"/> | |
| 199 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> | |
| 200 <userParam name="percolator:peptide_pep" value="1.000e+00"/> | |
| 189 </SpectrumIdentificationItem> | 201 </SpectrumIdentificationItem> |
| 190 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9624" name="scan number(s)"/> | 202 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9624" name="scan number(s)"/> |
| 191 </SpectrumIdentificationResult> | 203 </SpectrumIdentificationResult> |
| 192 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9597" id="SIR_98"> | 204 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9597" id="SIR_98"> |
| 193 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep365" calculatedMassToCharge="374.7237548828125" experimentalMassToCharge="375.2268981933594" chargeState="2" id="SII_98_1"> | 205 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep365" calculatedMassToCharge="374.7237548828125" experimentalMassToCharge="375.2268981933594" chargeState="2" id="SII_98_1"> |
| 215 <userParam value="6.174447" name="StdevErrorTop7"/> | 227 <userParam value="6.174447" name="StdevErrorTop7"/> |
| 216 <userParam value="-10.314375" name="MeanRelErrorAll"/> | 228 <userParam value="-10.314375" name="MeanRelErrorAll"/> |
| 217 <userParam value="6.908051" name="StdevRelErrorAll"/> | 229 <userParam value="6.908051" name="StdevRelErrorAll"/> |
| 218 <userParam value="-10.314375" name="MeanRelErrorTop7"/> | 230 <userParam value="-10.314375" name="MeanRelErrorTop7"/> |
| 219 <userParam value="6.908051" name="StdevRelErrorTop7"/> | 231 <userParam value="6.908051" name="StdevRelErrorTop7"/> |
| 232 <userParam name="percolator:score" value="-1.122"/> | |
| 233 <userParam name="percolator:psm_p_value" value="0.000e+00"/> | |
| 234 <userParam name="percolator:psm_q_value" value="1.000e+00"/> | |
| 235 <userParam name="percolator:psm_pep" value="1.000e+00"/> | |
| 236 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> | |
| 237 <userParam name="percolator:peptide_pep" value="1.000e+00"/> | |
| 220 </SpectrumIdentificationItem> | 238 </SpectrumIdentificationItem> |
| 221 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9597" name="scan number(s)"/> | 239 <cvParam accession="MS:1001115" cvRef="PSI-MS" value="9597" name="scan number(s)"/> |
| 222 </SpectrumIdentificationResult> | 240 </SpectrumIdentificationResult> |
| 223 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9535" id="SIR_36"> | 241 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9535" id="SIR_36"> |
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| 264 <userParam value="0.0" name="StdevErrorTop7"/> | 282 <userParam value="0.0" name="StdevErrorTop7"/> |
| 265 <userParam value="7.1771297" name="MeanRelErrorAll"/> | 283 <userParam value="7.1771297" name="MeanRelErrorAll"/> |
| 266 <userParam value="0.0" name="StdevRelErrorAll"/> | 284 <userParam value="0.0" name="StdevRelErrorAll"/> |
| 267 <userParam value="7.1771297" name="MeanRelErrorTop7"/> | 285 <userParam value="7.1771297" name="MeanRelErrorTop7"/> |
| 268 <userParam value="0.0" name="StdevRelErrorTop7"/> | 286 <userParam value="0.0" name="StdevRelErrorTop7"/> |
| 269 <userParam name="percolator:score" value="-1.307"/> | 287 <userParam name="percolator:score" value="-1.13"/> |
| 270 <userParam name="percolator:psm_p_value" value="8.449e-01"/> | 288 <userParam name="percolator:psm_p_value" value="0.000e+00"/> |
| 271 <userParam name="percolator:psm_q_value" value="1.000e+00"/> | 289 <userParam name="percolator:psm_q_value" value="1.000e+00"/> |
| 272 <userParam name="percolator:psm_pep" value="1.000e+00"/> | 290 <userParam name="percolator:psm_pep" value="1.000e+00"/> |
| 273 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> | 291 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> |
| 274 <userParam name="percolator:peptide_pep" value="1.000e+00"/> | 292 <userParam name="percolator:peptide_pep" value="1.000e+00"/> |
| 275 </SpectrumIdentificationItem> | 293 </SpectrumIdentificationItem> |
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| 321 <userParam value="-3.5387955" name="MeanRelErrorAll"/> | 339 <userParam value="-3.5387955" name="MeanRelErrorAll"/> |
| 322 <userParam value="6.8804927" name="StdevRelErrorAll"/> | 340 <userParam value="6.8804927" name="StdevRelErrorAll"/> |
| 323 <userParam value="-3.5387955" name="MeanRelErrorTop7"/> | 341 <userParam value="-3.5387955" name="MeanRelErrorTop7"/> |
| 324 <userParam value="6.8804927" name="StdevRelErrorTop7"/> | 342 <userParam value="6.8804927" name="StdevRelErrorTop7"/> |
| 325 <userParam name="percolator:score" value="-1.42"/> | 343 <userParam name="percolator:score" value="-1.144"/> |
| 326 <userParam name="percolator:psm_p_value" value="9.186e-01"/> | 344 <userParam name="percolator:psm_p_value" value="0.000e+00"/> |
| 327 <userParam name="percolator:psm_q_value" value="1.000e+00"/> | 345 <userParam name="percolator:psm_q_value" value="1.000e+00"/> |
| 328 <userParam name="percolator:psm_pep" value="1.000e+00"/> | 346 <userParam name="percolator:psm_pep" value="1.000e+00"/> |
| 329 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> | 347 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> |
| 330 <userParam name="percolator:peptide_pep" value="1.000e+00"/> | 348 <userParam name="percolator:peptide_pep" value="1.000e+00"/> |
| 331 </SpectrumIdentificationItem> | 349 </SpectrumIdentificationItem> |
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| 355 <userParam value="-2.0970254" name="MeanRelErrorAll"/> | 373 <userParam value="-2.0970254" name="MeanRelErrorAll"/> |
| 356 <userParam value="7.9635553" name="StdevRelErrorAll"/> | 374 <userParam value="7.9635553" name="StdevRelErrorAll"/> |
| 357 <userParam value="-2.0970254" name="MeanRelErrorTop7"/> | 375 <userParam value="-2.0970254" name="MeanRelErrorTop7"/> |
| 358 <userParam value="7.9635553" name="StdevRelErrorTop7"/> | 376 <userParam value="7.9635553" name="StdevRelErrorTop7"/> |
| 377 <userParam name="percolator:score" value="-1.153"/> | |
| 378 <userParam name="percolator:psm_p_value" value="0.000e+00"/> | |
| 379 <userParam name="percolator:psm_q_value" value="1.000e+00"/> | |
| 380 <userParam name="percolator:psm_pep" value="1.000e+00"/> | |
| 381 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> | |
| 382 <userParam name="percolator:peptide_pep" value="1.000e+00"/> | |
| 359 </SpectrumIdentificationItem> | 383 </SpectrumIdentificationItem> |
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| 361 </SpectrumIdentificationResult> | 385 </SpectrumIdentificationResult> |
| 362 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9681" id="SIR_182"> | 386 <SpectrumIdentificationResult spectraData_ref="SID_1" spectrumID="controllerType=0 controllerNumber=1 scan=9681" id="SIR_182"> |
| 363 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep371" calculatedMassToCharge="388.7393798828125" experimentalMassToCharge="389.2425537109375" chargeState="2" id="SII_182_1"> | 387 <SpectrumIdentificationItem passThreshold="true" rank="1" peptide_ref="Pep371" calculatedMassToCharge="388.7393798828125" experimentalMassToCharge="389.2425537109375" chargeState="2" id="SII_182_1"> |
| 382 <userParam value="1.2990792" name="StdevErrorTop7"/> | 406 <userParam value="1.2990792" name="StdevErrorTop7"/> |
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| 384 <userParam value="1.2990792" name="StdevRelErrorAll"/> | 408 <userParam value="1.2990792" name="StdevRelErrorAll"/> |
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| 386 <userParam value="1.2990792" name="StdevRelErrorTop7"/> | 410 <userParam value="1.2990792" name="StdevRelErrorTop7"/> |
| 411 <userParam name="percolator:score" value="-1.202"/> | |
| 412 <userParam name="percolator:psm_p_value" value="0.000e+00"/> | |
| 413 <userParam name="percolator:psm_q_value" value="1.000e+00"/> | |
| 414 <userParam name="percolator:psm_pep" value="1.000e+00"/> | |
| 415 <userParam name="percolator:peptide_q_value" value="1.000e+00"/> | |
| 416 <userParam name="percolator:peptide_pep" value="1.000e+00"/> | |
| 387 </SpectrumIdentificationItem> | 417 </SpectrumIdentificationItem> |
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| 389 </SpectrumIdentificationResult> | 419 </SpectrumIdentificationResult> |
| 390 </SpectrumIdentificationList> | 420 </SpectrumIdentificationList> |
| 391 </AnalysisData> | 421 </AnalysisData> |