comparison nested_collection.py @ 3:abed51712ed0 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tools/percolator commit b3873302e7bb7917a43b455875208e6e9fcf8f66

2:7a0951d0e13e

    parser.add_argument('--pool-ids', dest='poolids', nargs='+', default=False)
    args = parser.parse_args()
    for batchcount, (pool_id, batch) in enumerate(get_batches_of_galaxyfiles(
            args.realnames, args.batchsize, args.poolids)):
        for fncount, batchfile in enumerate([args.galaxyfiles[index] for index in batch]):
            dsetname = '{}_batch{}___inputfn{}.mzid'.format(pool_id, batchcount, fncount)
            print('producing', dsetname)
            os.symlink(batchfile, dsetname)

if __name__ == '__main__':
    main()

3:abed51712ed0

    parser.add_argument('--pool-ids', dest='poolids', nargs='+', default=False)
    args = parser.parse_args()
    for batchcount, (pool_id, batch) in enumerate(get_batches_of_galaxyfiles(
            args.realnames, args.batchsize, args.poolids)):
        for fncount, batchfile in enumerate([args.galaxyfiles[index] for index in batch]):
            dsetname = '{}_batch{}___inputfn{}.data'.format(pool_id, batchcount, fncount)
            print('producing', dsetname)
            os.symlink(batchfile, dsetname)

if __name__ == '__main__':
    main()