Mercurial > repos > galaxyp > proteinpilot

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              <section id="readme">

                  <article class="readme file">
                    <p>TODO: Document this tool repository.</p>
<h1 id="markdown-header-obtaining-tools">Obtaining Tools</h1>
<p>Repositories for all Galaxy-P tools can be found at
https:/bitbucket.org/galaxyp/.</p>
<h1 id="markdown-header-contact">Contact</h1>
<p>Please send suggestions for improvements and bug reports to
jmchilton@gmail.com.</p>
<h1 id="markdown-header-license">License</h1>
<p>All Galaxy-P tools are licensed under the Apache License Version 2.0
unless otherwise documented.</p>
<h1 id="markdown-header-tool-versioning">Tool Versioning</h1>
<p>Galaxy-P tools will have versions of the form X.Y.Z. Versions
differing only after the second decimal should be completely
compatible with each other. Breaking changes should result in an
increment of the number before and/or after the first decimal. All
tools of version less than 1.0.0 should be considered beta.</p>
                  </article>

              </section>


        <section id="repo-activity">
          <h1>
            Recent activity
            <a href="/galaxyp/galaxyp-toolshed-proteinpilot/rss" class="icon rss">RSS feed fo galaxyp-toolshed-proteinpilot</a>
          </h1>


<div class="newsfeed">


              <article class="news-item commit">
                <span class="icon commit"></span>


  <a href="/galaxyp"><img alt="galaxyp" src="https://secure.gravatar.com/avatar/655358b258b3fbd64aa5c6f42adade4e?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_team_avatar%2F32%2Fteam_blue.png&amp;s=32" class="avatar avatar32" /></a>


                <p>


  <a href="/galaxyp">galaxyp</a>

                  pushed 1 commit to


<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a>


                </p>
                <time datetime="2013-06-20T14:34:36+00:00">16 minutes ago</time>

                  <div class="changeset">
                  <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/478c9dfebeb1844401c1f5fcf6a55fefa6796655" class="changeset-hash">478c9df</a>
                  -


                      improved some datatype handling


                  </div>


              </article>


              </article>


              <article class="news-item commit">
                <span class="icon commit"></span>


  <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&amp;s=32" class="avatar avatar32" /></a>


                <p>


  <a href="/jmchilton">John Chilton</a>

                  pushed 1 commit to


<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a>


                </p>
                <time datetime="2013-05-05T19:06:30+00:00">2013-05-05</time>

                  <div class="changeset">
                  <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/eeb0664db8240d23a79fc406b6ae7c39f8159291" class="changeset-hash">eeb0664</a>
                  -


                      Add TMT options to protein pilot.


                  </div>


              </article>


              <article class="news-item commit">
                <span class="icon commit"></span>


  <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&amp;s=32" class="avatar avatar32" /></a>


                <p>


  <a href="/jmchilton">John Chilton</a>

                  pushed 1 commit to


<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a>


                </p>
                <time datetime="2013-04-22T15:57:02+00:00">2013-04-22</time>

                  <div class="changeset">
                  <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/3d9ab1d73205383c046a753bf779f707ae616d57" class="changeset-hash">3d9ab1d</a>
                  -


                      Fix name versus display_name property access.


                  </div>


              </article>


              <article class="news-item commit">
                <span class="icon commit"></span>


  <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&amp;s=32" class="avatar avatar32" /></a>


                <p>


  <a href="/jmchilton">John Chilton</a>

                  pushed 1 commit to


<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a>


                </p>
                <time datetime="2013-04-16T04:24:45+00:00">2013-04-16</time>

                  <div class="changeset">
                  <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/51a040d6310f38d2fb138acf6fb0a945a4532844" class="changeset-hash">51a040d</a>
                  -


                      Use config file to store input names and paths. This results in dramatically smaller command-lines (worry we are hitting the upperlimit of what Windows allows).


                  </div>


              </article>


              </article>


              <article class="news-item commit">
                <span class="icon commit"></span>


  <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&amp;s=32" class="avatar avatar32" /></a>


                <p>
                  Commits by

  <a href="/jmchilton">John Chilton</a>

                  were pushed to


<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a>


                </p>
                <time datetime="2013-02-08T18:44:07+00:00">2013-02-08</time>
                <div class="changeset">
                  <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/83f810baa907de50e87aa2efde99e088" class="changeset-hash">83f810b</a>
                  -

                    Add None as digestion option.

                </div>


              <div class="changeset">
                <a href="/galaxyp/galaxyp-toolshed-proteinpilot/commits/d2a889605d117c8bca26124d372841c1" class="changeset-hash">d2a8896</a>
                -

                  Initial commit.

              </div>


              </article>


            <article class="news-item create">
              <span class="icon create"></span>


  <a href="/jmchilton"><img alt="John Chilton" src="https://secure.gravatar.com/avatar/86cbb595c758989c14ae715c44588998?d=https%3A%2F%2Fd3oaxc4q5k2d6q.cloudfront.net%2Fm%2F968d9745b7be%2Fimg%2Fdefault_avatar%2F32%2Fuser_blue.png&amp;s=32" class="avatar avatar32" /></a>


              <p>


  <a href="/jmchilton">John Chilton</a>

                created


<a href="/galaxyp/galaxyp-toolshed-proteinpilot" title="galaxyp/galaxyp-toolshed-proteinpilot">galaxyp/galaxyp-toolshed-proteinpilot</a>

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              <time datetime="2012-08-13T18:27:01+00:00">2012-08-13</time>


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author	galaxyp
date	Thu, 20 Jun 2013 10:50:41 -0400
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