Mercurial > repos > galaxyp > proteomiqon_labeledproteinquantification

comparison aggregationparams.xml @ 0:cbdfdca98db3 draft

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_labeledproteinquantification commit eda2d62c81b38ed3975482d0198e3dd75ff1d74f"
author galaxyp
date Thu, 16 Sep 2021 21:11:34 +0000
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-1:000000000000 0:cbdfdca98db3
1 <macros>
2 <xml name="AggregationParams">
3 <section name="LabeledTransform" title="Labeled Transforms">
4 <conditional name="LabeledTransformLightCond">
5 <param name="Type" type="select" label="Light">
6 <option value="None">None</option>
7 <option value="Log2">Log2</option>
8 <option value="Substract">Substract</option>
9 <option value="Add">Add</option>
10 <option value="DivideBy">DivideBy</option>
11 <option value="MultiplyBy">MultiplyBy</option>
12 </param>
13 <when value="None">
14 </when>
15 <when value="Log2">
16 </when>
17 <when value="Substract">
18 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
19 </when>
20 <when value="Add">
21 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
22 </when>
23 <when value="DivideBy">
24 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
25 </when>
26 <when value="MultiplyBy">
27 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
28 </when>
29 </conditional>
30 <conditional name="LabeledTransformHeavyCond">
31 <param name="Type" type="select" label="Heavy">
32 <option value="None">None</option>
33 <option value="Log2">Log2</option>
34 <option value="Substract">Substract</option>
35 <option value="Add">Add</option>
36 <option value="DivideBy">DivideBy</option>
37 <option value="MultiplyBy">MultiplyBy</option>
38 </param>
39 <when value="None">
40 </when>
41 <when value="Log2">
42 </when>
43 <when value="Substract">
44 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
45 </when>
46 <when value="Add">
47 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
48 </when>
49 <when value="DivideBy">
50 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
51 </when>
52 <when value="MultiplyBy">
53 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
54 </when>
55 </conditional>
56 <conditional name="LabeledTransformRatioCond">
57 <param name="Type" type="select" label="Ratio">
58 <option value="None">None</option>
59 <option value="Log2">Log2</option>
60 <option value="Substract">Substract</option>
61 <option value="Add">Add</option>
62 <option value="DivideBy">DivideBy</option>
63 <option value="MultiplyBy">MultiplyBy</option>
64 </param>
65 <when value="None">
66 </when>
67 <when value="Log2">
68 </when>
69 <when value="Substract">
70 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
71 </when>
72 <when value="Add">
73 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
74 </when>
75 <when value="DivideBy">
76 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
77 </when>
78 <when value="MultiplyBy">
79 <param name="Value" type="float" value="0.0" optional="true" label="Value" />
80 </when>
81 </conditional>
82 </section>
83 <section name="LabeledSingleFilters" title="Labeled Single filters">
84 <section name="Light" title="Light">
85 <param name="BiggerThan" type="float" value="" optional="true" label="Is bigger than" />
86 <param name="SmallerThan" type="float" value="" optional="true" label="Is smaller than" />
87 </section>
88 <section name="Heavy" title="Heavy">
89 <param name="BiggerThan" type="float" value="" optional="true" label="Is bigger than" />
90 <param name="SmallerThan" type="float" value="" optional="true" label="Is smaller than" />
91 </section>
92 <section name="Ratio" title="Ratio">
93 <param name="BiggerThan" type="float" value="" optional="true" label="Is bigger than" />
94 <param name="SmallerThan" type="float" value="" optional="true" label="Is smaller than" />
95 </section>
96 </section>
97 <section name="LabeledGroupFilters" title="Labeled Group Filters">
98 <section name="Light" title="Light">
99 <param name="Tukey" type="float" value="" optional="true" label="Tukey" />
100 <param name="Stdev" type="float" value="" optional="true" label="Stdev" />
101 </section>
102 <section name="Heavy" title="Heavy">
103 <param name="Tukey" type="float" value="" optional="true" label="Tukey" />
104 <param name="Stdev" type="float" value="" optional="true" label="Stdev" />
105 </section>
106 <section name="Ratio" title="Ratio">
107 <param name="Tukey" type="float" value="" optional="true" label="Tukey" />
108 <param name="Stdev" type="float" value="" optional="true" label="Stdev" />
109 </section>
110 </section>
111 <section name="LabeledAggregation" title="Labeled Aggregation">
112 <param name="labeledAggregationLight" type="select" label="Light">
113 <option value="Mean">Mean</option>
114 <option value="Median">Median</option>
115 <option value="Sum">Sum</option>
116 </param>
117 <param name="labeledAggregationHeavy" type="select" label="Heavy">
118 <option value="Mean">Mean</option>
119 <option value="Median">Median</option>
120 <option value="Sum">Sum</option>
121 </param>
122 <param name="labeledAggregationRatio" type="select" label="Ratio">
123 <option value="Mean">Mean</option>
124 <option value="Median">Median</option>
125 <option value="Sum">Sum</option>
126 </param>
127 </section>
128 </xml>
129 </macros>