Mercurial > repos > galaxyp > proteomiqon_peptidedb

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"planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidedb commit c8f0a6706869a8f2988a096c61d7de7de573434f"
author galaxyp
date Sun, 04 Jul 2021 21:26:08 +0000
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        {
            "Name": "galaxy",
            "ParseProteinIDRegexPattern": "id",
            "Protease": { "Case": "Trypsin" },
            "MinMissedCleavages": 0,
            "MaxMissedCleavages": 2,
            "MaxMass": 15000.0,
            "MinPepLength": 4,
            "MaxPepLength": 65,
            "IsotopicMod": [
                {"Case":"N15"}
            ],
            "MassMode": {
                "Case": "Monoisotopic"
            },
            "FixedMods": [
                {"Case":"Acetylation'ProtNTerm'"},
                {"Case":"Carbamidomethyl'Cys'"},
                {"Case":"Oxidation'Met'"},
                {"Case":"Phosphorylation'Ser'Thr'Tyr'"},
                {"Case":"Pyro_Glu'GluNterm'"},
                {"Case":"Pyro_Glu'GlnNterm'"}
            ],
            "VariableMods": [
                {"Case":"Acetylation'ProtNTerm'"},
                {"Case":"Carbamidomethyl'Cys'"},
                {"Case":"Oxidation'Met'"},
                {"Case":"Phosphorylation'Ser'Thr'Tyr'"},
                {"Case":"Pyro_Glu'GluNterm'"},
                {"Case":"Pyro_Glu'GlnNterm'"}
            ],
            "VarModThreshold": 4
            }