# HG changeset patch # User galaxyp # Date 1627126803 0 # Node ID a79a24eb9e762917539df2ba9a11bd56aed56ba3 # Parent db6faafbf75b65142bf5fe98834ce3625ebef5c5 "planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/proteomiqon_peptidespectrummatching commit c36184e88da16842e748a19c2dfabaa30a1f6a15" diff -r db6faafbf75b -r a79a24eb9e76 proteomiqon_peptidespectrummatching.xml --- a/proteomiqon_peptidespectrummatching.xml Thu Jul 15 07:11:01 2021 +0000 +++ b/proteomiqon_peptidespectrummatching.xml Sat Jul 24 11:40:03 2021 +0000 @@ -179,7 +179,7 @@ With this it is possible to query the peptide data base for every precursor ion mass +/- a tolerance (which defines the so called 'search space') and retrieve peptides that are theoretical candidates for a match. For each of the peptide candidates we create an theoretical spectrum in silico and compare it to the measured MS/MS scan. -.. image:: PSM.png +.. image:: $PATH_TO_IMAGES/PSM.png :width: 768pt :height: 563pt