Mercurial > repos > galaxyp > qupath_roi_splitter

comparison test-data/annotations_TMA_F-5.geojson @ 0:b5e9cebb27e3 draft

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planemo upload for repository hhttps://github.com/npinter/ROIsplitter commit cdf3e9652b10c7a0b179202129a797e32fd95909
author galaxyp
date Tue, 25 Apr 2023 09:30:06 +0000
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-1:000000000000 0:b5e9cebb27e3
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4668 {
4669 "name": "Cell: Eosin OD mean",
4670 "value": 0.012921600602567196
4671 },
4672 {
4673 "name": "Cell: Eosin OD std dev",
4674 "value": 0.019617920741438866
4675 },
4676 {
4677 "name": "Cell: Eosin OD max",
4678 "value": 0.051754217594861984
4679 },
4680 {
4681 "name": "Cell: Eosin OD min",
4682 "value": -0.04170164465904236
4683 },
4684 {
4685 "name": "Cytoplasm: Hematoxylin OD mean",
4686 "value": 0.008080695755779743
4687 },
4688 {
4689 "name": "Cytoplasm: Hematoxylin OD std dev",
4690 "value": 0.023006128147244453
4691 },
4692 {
4693 "name": "Cytoplasm: Hematoxylin OD max",
4694 "value": 0.10712140798568726
4695 },
4696 {
4697 "name": "Cytoplasm: Hematoxylin OD min",
4698 "value": -0.018373243510723114
4699 },
4700 {
4701 "name": "Cytoplasm: Eosin OD mean",
4702 "value": 0.01384024042636156
4703 },
4704 {
4705 "name": "Cytoplasm: Eosin OD std dev",
4706 "value": 0.018833739683032036
4707 },
4708 {
4709 "name": "Cytoplasm: Eosin OD max",
4710 "value": 0.051754217594861984
4711 },
4712 {
4713 "name": "Cytoplasm: Eosin OD min",
4714 "value": -0.04170164465904236
4715 },
4716 {
4717 "name": "Nucleus/Cell area ratio",
4718 "value": 0.13458800315856934
4719 }
4720 ]
4721 }
4722 },
4723 {
4724 "type": "Feature",
4725 "geometry": {
4726 "type": "Polygon",
4727 "coordinates": [
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4730 [21373.8, 14314.6],
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4733 [21371.84, 14322.92],
4734 [21377.69, 14323.86],
4735 [21382.86, 14320.81],
4736 [21383.94, 14319.13],
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4756 "object_type": "cell",
4757 "classification": {
4758 "name": "Tumor",
4759 "colorRGB": -3670016
4760 },
4761 "isLocked": false,
4762 "measurements": [
4763 {
4764 "name": "Nucleus: Area",
4765 "value": 12.108599662780762
4766 },
4767 {
4768 "name": "Nucleus: Perimeter",
4769 "value": 13.365964889526367
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4771 {
4772 "name": "Nucleus: Circularity",
4773 "value": 0.8517324328422546
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4775 {
4776 "name": "Nucleus: Max caliper",
4777 "value": 5.329317092895508
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4780 "name": "Nucleus: Min caliper",
4781 "value": 2.9830143451690674
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4783 {
4784 "name": "Nucleus: Eccentricity",
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4788 "name": "Nucleus: Hematoxylin OD mean",
4789 "value": 0.28198176622390747
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4791 {
4792 "name": "Nucleus: Hematoxylin OD sum",
4793 "value": 4.5117082595825195
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4795 {
4796 "name": "Nucleus: Hematoxylin OD std dev",
4797 "value": 0.02770525962114334
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4799 {
4800 "name": "Nucleus: Hematoxylin OD max",
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4804 "name": "Nucleus: Hematoxylin OD min",
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4807 {
4808 "name": "Nucleus: Hematoxylin OD range",
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4812 "name": "Nucleus: Eosin OD mean",
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4820 "name": "Nucleus: Eosin OD std dev",
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4840 "name": "Cell: Perimeter",
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4860 "name": "Cell: Hematoxylin OD mean",
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4865 "value": 0.05567134916782379
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4868 "name": "Cell: Hematoxylin OD max",
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4912 "name": "Cytoplasm: Eosin OD std dev",
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4915 {
4916 "name": "Cytoplasm: Eosin OD max",
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4919 {
4920 "name": "Cytoplasm: Eosin OD min",
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4923 {
4924 "name": "Nucleus/Cell area ratio",
4925 "value": 0.11559037119150162
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4928 }
4929 }
4930 ]}