Mercurial > repos > galaxyp > reactome_pathwaymatcher
comparison pathwaymatcher.xml @ 5:a2ab72e994dc draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/pathwaymatcher commit e86212821a8621c4e99150c6fd7e4c4a1437a110
| author | galaxyp |
|---|---|
| date | Sun, 04 Aug 2019 15:52:53 -0400 |
| parents | 3e510701a712 |
| children | 622dd6d51032 |
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| 4:3e510701a712 | 5:a2ab72e994dc |
|---|---|
| 2 <description> | 2 <description> |
| 3 PathwayMatcher is a software tool to search for pathways related to a list of proteins in Reactome. | 3 PathwayMatcher is a software tool to search for pathways related to a list of proteins in Reactome. |
| 4 </description> | 4 </description> |
| 5 <macros> | 5 <macros> |
| 6 <token name="@PATHWAYMATCHER_VERSION@">1.9.1</token> | 6 <token name="@PATHWAYMATCHER_VERSION@">1.9.1</token> |
| 7 <token name="@TOOL_SUBVERSION@">2</token> | 7 <token name="@TOOL_SUBVERSION@">3</token> |
| 8 <xml name="input_fasta"> | 8 <xml name="input_fasta"> |
| 9 <param format="fasta" name="input_database" type="data" label="Protein Database" | 9 <param format="fasta" name="input_database" type="data" label="Protein Database" |
| 10 help="Select FASTA database from history"/> | 10 help="Select FASTA database from history"/> |
| 11 </xml> | 11 </xml> |
| 12 </macros> | 12 </macros> |
| 569 .. _Output: https://github.com/PathwayAnalysisPlatform/PathwayMatcher/wiki/Output | 569 .. _Output: https://github.com/PathwayAnalysisPlatform/PathwayMatcher/wiki/Output |
| 570 | 570 |
| 571 </help> | 571 </help> |
| 572 | 572 |
| 573 <citations> | 573 <citations> |
| 574 <citation type="doi">doi:10.1101/375097</citation> | 574 <citation type="doi">doi:10.1093/gigascience/giz088</citation> |
| 575 </citations> | 575 </citations> |
| 576 | 576 |
| 577 </tool> | 577 </tool> |