comparison regex.xml @ 4:399da6b5ec21 draft

planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/regex_find_replace commit a9b01eafeefb50c416fbfe342b15298fe9321679

3:ae8c4b2488e7

<tool id="regex1" name="Regex Find And Replace" version="1.0.1">
  <description></description>
  <requirements>
    <requirement type="package" version="3.7">python</requirement>
  </requirements>
  <command>

    #end for
  </command>
  <inputs>
    <param format="txt" name="input" type="data" label="Select lines from"/>
    <repeat name="checks" title="Check">
      <param name="pattern" size="40" type="text" value="chr([0-9A-Za-z])+" label="Find Regex" help="here you can enter text or regular expression (for syntax check lower part of this frame)">
        <sanitizer>
          <valid>
            <add preset="string.printable"/>
            <remove value="&#92;" />
            <remove value="&apos;" />

            <add source="&#92;" target="__backslash__" />
            <add source="&apos;" target="__sq__"/>
          </mapping>
        </sanitizer>
      </param>
      <param name="replacement" size="40" type="text" value="newchr\1" label="Replacement">
        <sanitizer>
          <valid>
            <add preset="string.printable"/>
            <remove value="&#92;" />
            <remove value="&apos;" />

4:399da6b5ec21

<tool id="regex1" name="Regex Find And Replace" version="1.0.2" profile="21.01">
  <description></description>
  <requirements>
    <requirement type="package" version="3.7">python</requirement>
  </requirements>
  <command>

    #end for
  </command>
  <inputs>
    <param format="txt" name="input" type="data" label="Select lines from"/>
    <repeat name="checks" title="Check">
      <param name="pattern" type="text" value="chr([0-9A-Za-z]+)" label="Find Regex" help="here you can enter text or regular expression (for syntax check lower part of this frame)">
        <sanitizer>
          <valid>
            <add preset="string.printable"/>
            <remove value="&#92;" />
            <remove value="&apos;" />

            <add source="&#92;" target="__backslash__" />
            <add source="&apos;" target="__sq__"/>
          </mapping>
        </sanitizer>
      </param>
      <param name="replacement" type="text" value="newchr\1" label="Replacement">
        <sanitizer>
          <valid>
            <add preset="string.printable"/>
            <remove value="&#92;" />
            <remove value="&apos;" />