Mercurial > repos > galaxyp > searchgui

comparison tool_dependencies.xml @ 3:379da3c75204 draft

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author galaxyp
date Tue, 25 Jun 2013 12:35:22 -0400
parents 96d4c130655f
children ed6c825d5fa4
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2:96d4c130655f 3:379da3c75204
2 <tool_dependency> 2 <tool_dependency>
3 <package name="SearchGUI" version="1.13.1"> 3 <package name="SearchGUI" version="1.13.1">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="download_by_url">http://searchgui.googlecode.com/files/SearchGUI-1.13.1_mac_and_linux.zip</action> 6 <action type="download_by_url">http://searchgui.googlecode.com/files/SearchGUI-1.13.1_mac_and_linux.zip</action>
7 <action type="shell_command">ls</action>
7 <action type="shell_command">tar -xf 'SearchGUI-1.13.1_mac_and_linux.tar'</action> 8 <action type="shell_command">tar -xf 'SearchGUI-1.13.1_mac_and_linux.tar'</action>
8 <action type="shell_command">cd 'SearchGUI-1.13.1_mac_and_linux'</action> 9 <action type="shell_command">cd 'SearchGUI-1.13.1_mac_and_linux'&amp;&amp; chmod -R o+w 'resources' </action>
9 <action type="shell_command">chmod -R o+w 'resources'</action>
10 <action type="move_directory_files"> 10 <action type="move_directory_files">
11 <source_directory>.</source_directory> 11 <source_directory>.</source_directory>
12 <destination_directory>$INSTALL_DIR/</destination_directory> 12 <destination_directory>$INSTALL_DIR/</destination_directory>
13 </action> 13 </action>
14 <action type="shell_command">mkdir -p $BIN_DIR</action>
15 <action type="set_environment"> 14 <action type="set_environment">
16 <environment_variable name="PATH" action="prepend_to">$BIN_DIR</environment_variable> 15 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable>
17 </action> 16 </action>
18 </actions> 17 </actions>
19 </install> 18 </install>
20 <readme> 19 <readme>
21 This package downloads and installs the SearchGUI scripts develped as part of the Peptideshaker tool. 20 This package downloads and installs the SearchGUI scripts develped as part of the Peptideshaker tool.