Mercurial > repos > galaxyp > thermo_raw_file_converter
comparison thermo_converter.xml @ 2:edbeb2956484 draft
planemo upload for repository https://github.com/galaxyproteomics/tools-galaxyp/tree/master/tools/ThermoRawfileParser commit 9de08588cd6c525947f92bf475a144fcd6129fde
| author | galaxyp |
|---|---|
| date | Sun, 23 Sep 2018 07:50:25 -0400 |
| parents | 15d2a50acaeb |
| children | a3edda696e4d |
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| 1:15d2a50acaeb | 2:edbeb2956484 |
|---|---|
| 12 -i=input.raw | 12 -i=input.raw |
| 13 -o=./ | 13 -o=./ |
| 14 -f=$output_format | 14 -f=$output_format |
| 15 #if $metadata: | 15 #if $metadata: |
| 16 --metadata=1 | 16 --metadata=1 |
| 17 #end if | |
| 18 && | |
| 19 #if $output_format == '0': | |
| 20 mv ./input.mgf '$output' | |
| 21 #else: | |
| 22 mv ./input.mzML '$output' | |
| 17 #end if | 23 #end if |
| 18 ]]> | 24 ]]> |
| 19 </command> | 25 </command> |
| 20 <inputs> | 26 <inputs> |
| 21 <param name="input" type="data" format="thermo.raw" label="Thermo RAW file" help="" /> | 27 <param name="input" type="data" format="thermo.raw" label="Thermo RAW file" help="" /> |