Mercurial > repos > gandres > vcftools_filter_stats_diversity
comparison VCFToolFilter/vcfToolsFilter.xml @ 4:b762ecbe2314 draft
planemo upload
| author | gandres |
|---|---|
| date | Fri, 11 Dec 2015 07:35:00 -0500 |
| parents | 612066e3f57d |
| children | 1420a55ca72b |
comparison
equal
deleted
inserted
replaced
| 3:612066e3f57d | 4:b762ecbe2314 |
|---|---|
| 93 <param name="nb_alleles_min" value="2" /> | 93 <param name="nb_alleles_min" value="2" /> |
| 94 <param name="nb_alleles_max" value="4" /> | 94 <param name="nb_alleles_max" value="4" /> |
| 95 <param name="type_p" value="ALL" /> | 95 <param name="type_p" value="ALL" /> |
| 96 <param name="bound_start" value="1" /> | 96 <param name="bound_start" value="1" /> |
| 97 <param name="bound_end" value="100000000" /> | 97 <param name="bound_end" value="100000000" /> |
| 98 <output name="fileout" file="result.vcf" /> | 98 <output name="fileout" file="filter-result.vcf" /> |
| 99 </test> | 99 </test> |
| 100 <test> | 100 <test> |
| 101 <param name="filein" value="sample.vcf" /> | 101 <param name="filein" value="sample.vcf" /> |
| 102 <param name="export" value="plink" /> | 102 <param name="export" value="plink" /> |
| 103 <param name="type_p" value="SNP" /> | 103 <param name="type_p" value="SNP" /> |
| 104 <output name="fileout" file="result.ped" /> | 104 <output name="fileout" file="filter-result.ped" /> |
| 105 <output name="fileout_map" file="result.map" /> | 105 <output name="fileout_map" file="filter-result.map" /> |
| 106 </test> | 106 </test> |
| 107 <test> | 107 <test> |
| 108 <param name="filein" value="sample.vcf" /> | 108 <param name="filein" value="sample.vcf" /> |
| 109 <param name="export" value="freq" /> | 109 <param name="export" value="freq" /> |
| 110 <param name="type_p" value="ALL" /> | 110 <param name="type_p" value="ALL" /> |
| 111 <output name="fileout" file="result.frq" /> | 111 <output name="fileout" file="filter-result.frq" /> |
| 112 </test> | 112 </test> |
| 113 </tests> | 113 </tests> |
| 114 | 114 |
| 115 <!-- [OPTIONAL] Help displayed in Galaxy --> | 115 <!-- [OPTIONAL] Help displayed in Galaxy --> |
| 116 <help> | 116 <help> |