Mercurial > repos > gandres > vcftools_filter_stats_diversity
diff VCFToolFilter/vcfToolsFilter.sh @ 3:612066e3f57d draft
Uploaded
author | gandres |
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date | Mon, 09 Nov 2015 05:18:45 -0500 |
parents | ac7c9e40d601 |
children | b762ecbe2314 |
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--- a/VCFToolFilter/vcfToolsFilter.sh Fri Jul 10 04:16:17 2015 -0400 +++ b/VCFToolFilter/vcfToolsFilter.sh Mon Nov 09 05:18:45 2015 -0500 @@ -3,18 +3,18 @@ tool_path=$(dirname $0) filein=$1 -fileout_label=$2 -fileout=$3 -filelog=$4 -export=$5 -frequency=$6 -max_freq=$7 -allow_missing=$8 -nb_alleles_min=$9 -nb_alleles_max=${10} -type=${11} -bound_start=${12} -bound_end=${13} +fileout_label=$(date "+%Y%m%d%H%M%S") +fileout=$2 +filelog=$3 +export=$4 +frequency=$5 +max_freq=$6 +allow_missing=$7 +nb_alleles_min=$8 +nb_alleles_max=9 +type=${10} +bound_start=${11} +bound_end=${12} if [ "${14}" != "None" ]