diff WebServiceToolWorkflow/WebServiceTool1.xml~ @ 0:d5cd409b8a18 default tip

Migrated tool version 1.0.0 from old tool shed archive to new tool shed repository

--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/WebServiceToolWorkflow/WebServiceTool1.xml~	Tue Jun 07 18:00:50 2011 -0400
@@ -0,0 +1,77 @@
+<tool id="WebServiceTool_input_url" name="Step 1:Enter information about tool">
+  <description> This tool takes the URL of an external Web service. The URL should point to the description document of a Web service. Currently support for only REST Web services is provided. Therefore, this description document can be a WADL or WSDL 2.0 or SAWADL document only.</description>
+  <command interpreter="python">
+        WebServiceTool_input_url.py 
+        $url
+        $output
+  </command>
+  <inputs>
+       <param format="text" size = "60" name = "url" type="text" label="Enter the tool description document location" help="see tip below"/>
+  </inputs>
+  <outputs>
+    <data format="tabular" name="output" />
+  </outputs>
+
+  <tests>
+    <test>    
+      <param name="url" value="127.0.0.1:5001/hello/form"/>
+      <output name="output" file="outtest"/>
+    </test>
+  </tests>
+
+  <help>
+  
+.. class:: infomark
+
+**TIP:** Enter the url (of the REST Web service) description document of type WADL, WSDL 2.0, or SAWADL in the above box.
+
+
+All the Web services come with a description document like WADL or WSDL document. Galaxy can read this information
+to create the tool.
+
+For further assistance find samples of WADL, WSDL 2.0 and SAWADL below.
+
+WADL :   DDBJ sample services:
+
+	 http://cs.uga.edu/__tilda__ganjoo/galaxy/DDBJBlast.wadl
+
+
+         http://cs.uga.edu/__tilda__ganjoo/galaxy/DDBJGetEntry.wadl
+
+
+         http://cs.uga.edu/__tilda__ganjoo/galaxy/DDBJNCBIGenomeAnnotationGetGeneList.wadl
+
+
+         http://cs.uga.edu/__tilda__ganjoo/galaxy/Ensembl.wadl
+         
+         
+         More detailed information about all REST services at DDBJ can be found at http://www.xml.nig.ac.jp/index.html
+
+
+         EuPathDB sample services:
+         
+         http://eupathdb.org/webservices/GeneQuestions/GenesByMolecularWeight.wadl
+  
+
+         http://eupathdb.org/eupathdb/webservices/GeneQuestions/GenesByTextSearch.wadl
+         
+         
+         More detailed information about all REST services at EuPathDB can be found at http://eupathdb.org/eupathdb/serviceList.jsp
+
+
+SAWADL : 
+
+         http://cs.uga.edu/__tilda__ganjoo/galaxy/GenesByTextSearch.sawadl
+
+
+WSDL 2.0 : 
+
+         http://cs.uga.edu/__tilda__ganjoo/galaxy/booklist.wsdl
+
+*NOTE: Step 1, Step 2 and Step 3 merely add this tool to Galaxy. To use the tool, after completing Step 3, go to the Tools section on left
+and find the tool under Web Service Tools and Web Service Workflow Tools.*
+
+  </help>
+
+</tool>
+