Mercurial > repos > gbcs-embl-heidelberg > je_markdupes

diff test-data/clip_dataset1_PE.fastq @ 0:d39a96961423 draft

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Initial upload
author gbcs-embl-heidelberg
date Wed, 25 Nov 2015 12:36:12 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/clip_dataset1_PE.fastq	Wed Nov 25 12:36:12 2015 -0500
@@ -0,0 +1,100 @@
+@D3FCO8P1:229:C49NHACXX:8:1101:1347:2097:1:N:0:CACTGT
+TCAATGCCAATAGCAATGAAACCACCCATANAANNNNNACGGCTGAACANNNNNNNACNNGATATAGCATAAATGNANNNTNNNNANTNNNNNN
++
+FFHHHHHJJJJJJJJJJJIJJJIJJJJJJI#1?#####00?FHIJJJJI#######--##,,=A=CDDDDDDDEE###################
+@D3FCO8P1:229:C49NHACXX:8:1101:1406:2140:1:N:0:CACTGT
+AATTTATCTCTTTTCATATAACTCTCTGGTAATNNNNAACATAAAACCGANCGCACATGATAATTCTTCCAAATTTATATATNAATTTTATANN
++
+DFHHHGHHIJJJJJJIJIJIGHHHIJJJJGGIJ####11?DHHIIIIGHI#-<FEHGIJIJHGHFHHHHHFFFFFFEFEEEE#,;?BDDFDE##
+@D3FCO8P1:229:C49NHACXX:8:1101:1418:2170:1:N:0:CACTGT
+TGTAAAGTAGCTAATCAACTAAAAATTTTAATTCCAGTAGGAACTGCAATNATTATAGTAGCTGAGGTAAAATAAGCTCGAGTATCTACATCTA
++
+FFHHHHHIJJJJJJJJJJJJIJJJJJJJJJJJJIJJJIIJJJJJJJJJJI#0?FHIJJJJJJJJGIJHIIJJJHHHHHHFFD@CEEEFDDDDDC
+@D3FCO8P1:229:C49NHACXX:8:1101:1385:2179:1:N:0:CACTGT
+ACCAGACTTGTGGGGCGACTGTTCAGGCCGTGTAGGGCATTCAGGGGTAGCATGGGAGCAGCTAGATTAGATGCAGATCTCTGAGAAGCTGTCT
++
+BDDBFDFIIEF??8@EFGFHFGAFFGGIHH;5.=CEE),7.;(;ACB9>?CAAC??9?B@9??C:(:@A::@CC:4+:>@C@AAC(>9?CCCC@
+@D3FCO8P1:229:C49NHACXX:8:1101:1452:2184:1:N:0:CACTGT
+GTGGGAAAGGGAAGGGCAAGGGGGAGGGGAAGAATTTAACCGGGCGGGAGGAGAATCGGGCAGGGAAGAATGGTTGGTTGGTGGAACAACTGAA
++
+EDHHHDHJJGIGIJCBDHEHGJJJBGEHIBGGHFGFFGGHFFDD>?BDBBDDDDDD@ADD;>@D98AB?CCDD:CBB<ADD8<?<@?B?ACDCA
+@D3FCO8P1:229:C49NHACXX:8:1101:1370:2193:1:N:0:CACTGT
+GCGAGTGTTTGCACGATTATCTCATATTCAAACTGGTCAACATGGGCATACGATTTCTTGCGCTCCTTGCTTTCAAACAGCCTGTCTCTTATAC
++
+F+CFHFHIIJJJJJJIJJIJJJJJJJJJJIJJJJJJBGIJJJJJJJJJJJJJJJJIJJJJHHFFFDEEEDDDDDDDDDDDBBDDDDDDDDDDDD
+@D3FCO8P1:229:C49NHACXX:8:1101:1486:2204:1:N:0:ATTCCG
+CATCTGTTGCTCATATAGGAATTGTTCTATCAGGACTTTTAACTATAACTTATTGAGGTTTATGTGGTTCTTATACATTAATAATTGCTCATGG
++
+DFHHHGHJJIJJJJJJJJJJJJJJJJJJIJJJJJJJIJJJIJJJJJJIJJJJJJIJJJHIJJJJHIIHHHHIJJJIJJHHHHHHFFFFEFCEEE
+@D3FCO8P1:229:C49NHACXX:8:1101:1460:2207:1:N:0:ATTCCG
+GTCGTTGTGATACTAAACTTTCTCAAATAATAAAAAAAAAGAATAAAATTCCTAATAATGAAATAGTTGATCCAATAGTTGATACAATATTTCA
++
+FFHHHGHIIGIJJIIJJJJJJIIHIIJHGIHGJIJIJJJHGCCHIGGEHH>EEFFFFFFFACCEACEDCDCCCCCDCDEEDDDE(:ACCD:@D@
+@D3FCO8P1:229:C49NHACXX:8:1101:1339:2211:1:N:0:ATTCCG
+AGTAAATTAAATGCGAAAATAAAAGGCAGCATGAGNTANTTACTNAAANGGGGTCATNAACAGTACTTGTGCTCCNCCANGTCGNCGNTNCNCT
++
+FFFHHHHJJJIJJJJJJJIJIJJJJJJJJJJJJJJ#0?#0?DHI#-;F#-;DH?EFH#,;BCDEEEEEDDCCCDD#,8?#,5?B##########
+@D3FCO8P1:229:C49NHACXX:8:1101:1402:2222:1:N:0:ATTCCG
+ATAGTAATAATATTACCTAATACAAATAATGAAATATCATATTGATGAAATCATTTTACTATACCTGATACAGTTGTTATAGCTCCGATAGCTC
++
+FDFHHHHJJIIJJJGJIIJJIIJHIJIJIJIIJJJJJJJIIJJIGGHIJJJIJGJJIIIHIIHJ>GHIIIIIIGGGIIJJJJIH)=ABDDDDEE
+@D3FCO8P1:229:C49NHACXX:8:1101:1388:2233:1:N:0:ATTCCG
+AATTTAATGCAATTACCAATCTTACAAGTTATTATACCAATAATTGCATCTATGTTTTGCTTTCTTGACAAGAAACACAAGGTAACTTGGGTTA
++
+DD<DFDFB<?:EIBHHIIFF:AHI?HC<*:1:EF@G49D<B3?@F4?BDD*BG*?B??B<B8888@F)).@;@;@;=6?###############
+@D3FCO8P1:229:C49NHACXX:8:1101:1497:2240:1:N:0:ATTCCG
+GGCATCGTTGCTGCTCTTAACGTCCAAATGGACGGGCGACTCCCCGAACATTGCCTCGAGTCGTGTCTCCACGGATTTCTGGACGTCCGAATCG
++
+FFHHHHHJJJIIIJIHGIJJIHHJJJHIJJJFHIJJBHGGHHHHFEDDDDDDDDDDDDDDCCBDDDDDDDDDDDDDDDDEDD@BDDDDBB@BBD
+@D3FCO8P1:229:C49NHACXX:8:1101:1399:2245:1:N:0:ATTCCG
+AAATATAAAGTATAAGCAGCTCTAAAAAAAGATAAAAAAGATAATAAAATTATAGAAATTCAAGATCAAGAAACAATTCTATTTAATAAAGAAA
++
+FFFBDFHGIGHGJIJJJJJIIDHHIJJIGGHEEGGIIIIGGDHIGE@FHHIIJJFGGHGHCAHH@D;CD;CCCECDDCCDDDCD3>ACAA:@?C
+@D3FCO8P1:229:C49NHACXX:8:1101:1664:2088:1:N:0:GCTACC
+AAGTTTATAAATGGCAACCTTAAGTGTAANNNANNNNNTATGCACAGNANNNNNNNNANNNATGCAAAACGACTCNNNNNNNNNNNNCNNNNNN
++
+FFHHHHHJJJJJJJJJJJJJJJJJIIHIJ###1#####20?FHJJJJ#.########-###--;BDFEEECDDDD###################
+@D3FCO8P1:229:C49NHACXX:8:1101:1512:2095:1:N:0:GCTACC
+ACGTTCATAAGATACATTAGCTAAACAAAANAANNNNNAAGAACATAAANNNNNNNCANNTATTAATGTATAAGANCNNNANNNNCNTNNNNNN
++
+FFHHHHHJJJJJJIJJJJIJJJJIJJJJJJ#1C#####00?FIJJJJJJ#######--##,5?DDEEEFCFFEDD###################
+@D3FCO8P1:229:C49NHACXX:8:1101:1630:2114:1:N:0:GCTACC
+CGTTGGAGGAGGAGCCGCCATGAATGCCCTGCGNNNNTTCTACCTGGAGANNNCGGTGGTCACACGAGCCTACACCACGGTCNNCGTGCTNNNN
++
+FFHHHHGJJGHJGHIJJJJJJJJJJJJJJJJJJ####.-;DHIJJHHHHH###,,=?BDBDDDDDDDDDDDDDDDDDDDDDD##+28@DD####
+@D3FCO8P1:229:C49NHACXX:8:1101:1540:2119:1:N:0:GCTACC
+TGGACTCAAGACCTAATTGCATTAACCGTCTGTNNNNTACGTAGCGTATGNNATTGCGCACTTCTTCTGCGGATAGTCCTTCNNCATCTCNNNN
++
+FFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJIJ####20?GHIJJJIJIJ##-5CEFHFFDDEEDDDDDDDDDDDDDEDDDD##+2?BDD####
+@D3FCO8P1:229:C49NHACXX:8:1101:1503:2124:1:N:0:GCTACC
+TACATATACTTATAGGCATACTTATACGACTTCNNNNCCCGGTTAATATGNNGTGGCCCGTATAAGTTAATGGGCACAACCGNNTGGGACNNNN
++
+FFHHHHHIJJJJJJJJJJJIJJJJJJJJJJJJJ####00BFHGIIJJJJJ##--BEHJJHDFFEDEEFEEEDDDDDDDDDDD##+2<B@B####
+@D3FCO8P1:229:C49NHACXX:8:1101:1671:2150:1:N:0:GCTACC
+TCCACTCGCATGTGTATCTAATGAATGCCTCAANACGCTCCTGAACGCAANCAGGTATGTGTGGTAGACCAAAAAAAAAAAANCGGCAGGTANN
++
+FFHHHHHJJJJJJJHIJJJJJJJJJJJJJJJJJ#2?FHIJJJJHIJJJJJ#.;DHCHHHHHHHFDFFEEEEDDDDDDDDDDD############
+@D3FCO8P1:229:C49NHACXX:8:1101:1552:2151:1:N:0:CGAAAC
+AACTTAAGGCTGAAAATTATTTATTTGACTTGTGTCAAATATAAAAATGTNTTGTGTAGAAACGGTAATGTGAAATTAATGTNAAATATTCTNN
++
+FFHHHHHJJJJJJJJJJJJJJJJJJIIIJJJJHIJJJJIJIJJJIJIJJI#0?FGIIJJJJJJIIEIJJHHHGHHHFFFFFF#,;ABDEDEE##
+@D3FCO8P1:229:C49NHACXX:8:1101:1700:2159:1:N:0:CGAAAC
+TGCAATGCAAGTGGATTAGAGGATTGCAGCTGGAGGGGTAACAGCAGTGCNTTCGAAATATGTATCTTACAGCATTTCTGGGNTCCTCGTCCGN
++
+FFHHHHHJJJJHIIIIJIJIJJJJJJJJJJJJJFHJJJ?FHCFFHGIGHC#-5;DHHFHHHFCDFFFFFEEEECEDCDCCDC#,8<BBDABB##
+@D3FCO8P1:229:C49NHACXX:8:1101:1652:2170:1:N:0:CGAAAC
+CTCTTGGGTGTATTGGTTGGCCGTTTTACTCTTTTGTTGGAGACTGAGAANCTTAGCTGATATAACTTCTACCGATTCTCCTTTAACTGCACTT
++
+FFHFHHHI?FEEEHHIHHGIEGHHIJJHIIGIIIJFGIJJHIIIEHIIHG#-;CEHHHHDFFFFFDEEC@CECDD?@CDD@CACDCDDDDCDDD
+@D3FCO8P1:229:C49NHACXX:8:1101:1537:2174:1:N:0:CGAAAC
+AAATGACCAAATCCTAGGTGTTTGAGCGCGGACTGGAGGCGATTCCGCTGTCCGTGGATCTGTGGATCCACTACCTAATGCACGTTAAGTCCAA
++
+DDHHAHHGGB@BHIIIFE<AHHI;4?9DHGE@A;AHGEHEE>AC@@CB@BBA@?BBBBA@CCDCCCCC<493?CCCCCC>:>A<8???AC####
+@D3FCO8P1:229:C49NHACXX:8:1101:1563:2176:1:N:0:CGAAAC
+GGAAGAGAAAAAAATATAAAGTGTCAAGGGGCGTGTGCAGCGACACTTCGCCGACCCCTCCCCACATTATTTTTTTGCCGCCCGCTGGTAGCAG
++
+DA:DBFDF;A<A@EGGB@:?D1:D?9:BGIDGE4@###########################################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1587:2187:1:N:0:CGAAAC
+AAATAATCAAACTACATCGACAAAATGTCAATATCATGCAGCTGCTTCAAAACCAAAATGATGATTTTTTGAGAAGTGATTATTTAAATGTCGT
++
+FFHHHHHJJJJJJJJJJJJJJJJJIJJIJJJJJJJJJJJJJJJJJJJJJJJJJJIJIJJJJJJJJJJHHFFDDDEDCDDFEEDFEEEDEEFEDD