Mercurial > repos > gbcs-embl-heidelberg > je_markdupes

diff test-data/clip_dataset2_PE.fastq @ 0:d39a96961423 draft

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Initial upload
author gbcs-embl-heidelberg
date Wed, 25 Nov 2015 12:36:12 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/clip_dataset2_PE.fastq	Wed Nov 25 12:36:12 2015 -0500
@@ -0,0 +1,100 @@
+@D3FCO8P1:229:C49NHACXX:8:1101:1347:2097:4:N:0:GTATAG
+AGAATGGTGNNNNTGTNNNNNTCCTAATATTCCATTTATGCTATATCCAGTCGTTCTNNNNNNNNNNNNNNNNNNNNNNNNNGTGGTTTCATNN
++
+2@>@@@@@@####43@#####11=?????????>?????????????????????@?#####################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1406:2140:4:N:0:GTATAG
+TTATATGAAAGNAATATAAAATTTATATATAAATTTGGAAGAATTATCATGTGCGCTCNNNNNNNNNTTANANATNNNNNNAGAGTTATATGAN
++
+2@@@@@@@?@@#3=>?@@?@@@?@?@>?????>????????????>??????@?????####################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1418:2170:4:N:0:GTATAG
+GCTATTGGATTATTAGGATTTATTGTATGAGCTCATCATATATTTACCGTTGGAATAGATNTAGATACTCGAGCTTATTTTACCTCAGCTACTA
++
+FFHHHHHJEHIHHJIJJHIJJIJJJIJJJIJJJJIJJJJIJIIJIGJJJJJJJJJJJJJJ#-;CFHIJJJHHHFFFFFEEEEEEEDDDDDDDDD
+@D3FCO8P1:229:C49NHACXX:8:1101:1385:2179:4:N:0:GTATAG
+AGAGATCTGCATCTAATCTAGCTGCTCCCATGCTACCCCTGAATACCCTACACGGCCTGAACAGTCGCCCCACAAGTCTGGCGTGGGGCTGTCT
++
+DFHF?HHGBHHIJJIGIIIJGIJBEHIGID<9EHIIJJI@;?BGGHIIIIIIIIIIIAGE@HHH?EDFDDB?B?9?:ACCC(85>>B>>@BBD@
+@D3FCO8P1:229:C49NHACXX:8:1101:1452:2184:4:N:0:GTATAG
+CATTCTGTATGCCCTTCCCTCTCGCACACTCGACCCAATGACCCGCTTTGCTCTGTTTACCTCTCCGCTCTGTTTTTGCACTTGGAAATTGCTA
++
+FFHGDHHGGIJJIJJJGHIIIGFHHIIGIIIJIJJEHGEGGIJJIIIIGGGHGGFHHFEC@BCEDECDDDDDDDDDD?AC>ACCCCACADCCDD
+@D3FCO8P1:229:C49NHACXX:8:1101:1370:2193:4:N:0:GTATAG
+TGAAAGCAAGGAGCGCAAGAAATCGTATGCCCATGTTGACCAGTTTGAATATGAGATAATCGTGCAAACACTCCCAAGGAACTGTCTCTTATAC
++
+FFHHHHHJJJJJJJJJJJJJJJJJJJJJJJJJIJJJJJHJJJJJGHIIIIIJJIJIJEEEEHHFFFEEEEDED3=CDDDDDDDDCDDDDDDDDD
+@D3FCO8P1:229:C49NHACXX:8:1101:1486:2204:4:N:0:TCCGTC
+TTCTTCGACTTCCAAGACGTTCATAAGATACATTAGCTAAACAAAATAACCCAGAAGAACATAAACCATGAGCAATTATTAATGTATAAGAACC
++
+FFHHHFHIJJJJJJJJJJIIGIIIJJIIGHJJJJIJJIIJIJJJIJJIJJJJJJJJIGIJIIJJHHFHHFFFFFEDEEEFFFEDDDEFEDDDDD
+@D3FCO8P1:229:C49NHACXX:8:1101:1460:2207:4:N:0:TCCGTC
+TATATTTATTGGAGTTAATTTAACATTTTTTCCTCAACATTTTTTAGGATTGGCTGGAATACCTCGACGTTATTCAGATTACCCAGATGCTTAC
++
+FDHDHHHIJJJJEHHHIIIIJIJHIHIJJJJIGHEIIIJJIJJJHHGIIIJIJIJIJEHGHGFHFH8?ABC?BC>>AADDCACDDDDD<@CD>>
+@D3FCO8P1:229:C49NHACXX:8:1101:1339:2211:4:N:0:TCCGTC
+GGCATAGCCATCGAGGTGTGTCCGGTGTCAAATCAAGTGCTGCAACTGGGCGTGGACTATCGGAATCATCCGGCGGCACTGCTGTTGGCCGCCA
++
+FFHHHHGJJJJJJIJJAGHHGIHHIDFGHIJJJGIJJGIJJIIJIJJIJJJJHHFEFEECACDDBB@CCD@?BDDDDDDDDDDDDCDB:@>BBD
+@D3FCO8P1:229:C49NHACXX:8:1101:1402:2222:4:N:0:TCCGTC
+GACCATTAACAGGAGCTATCGGAGCTATAACAACTGTATCAGGTATAGTAAAATGATTTCATCAATATGATATTTCATTATTTGTATTAGGTAA
++
+FFHHFHGJJJJJJIIJJGJIIJGHGHIIIJIJJIGIHIIGIIJBFDIIGHJJIJJGIEIEGHIJCH@EHFHGHHHGFFFFFFFFFDDEEDCAC@
+@D3FCO8P1:229:C49NHACXX:8:1101:1388:2233:4:N:0:TCCGTC
+AACCAAGATACCTTGTGTTTCTTGGCAAGAAAGCAAAACATTGATGCAATTATTGGTATAATAACTTGTAAGATTGGTAATTGCATTAAATTGT
++
+D4DB?:3E3+2AEAHHFIIIIIIIE9?9?3DGFF>;;F;D9BD9?@DCFFICFGF@FCF@@F@C@DF<7C@E3?ECC>7@DDBAADA;;;>A:A
+@D3FCO8P1:229:C49NHACXX:8:1101:1497:2240:4:N:0:TCCGTC
+CAGCAATCGCAGCAACAACTAAATGGAAACCAACAGCATCTGCCCATCAATCGTCAACCGGCGCCACAGCAATCACACTTCCTGGACAATTCAA
++
+FDHDHHHIGJIJJJJJJJIJJIJJJJJIJJJIIJJJJJJIIJJJHHGGGEGIJEHIJGHFFDDDDD@BBDCDDDDDDDDDDDDDDBDDBDDDDE
+@D3FCO8P1:229:C49NHACXX:8:1101:1399:2245:4:N:0:TCCGTC
+TTTATTAAATAGAATTGTTTCTTGATCTTGAATTTCTATAATTTTATTATCTTTTTTATCTTTTTTTAGAGCTGCTTATACTTTATATTTATAT
++
+EDHFHHGJIIHIEEHIIIIJIJJJ?FFHGHFGHIJHGGIGDFFIG9EHGHEHIJJJJGIFHIGIJJA=;?>CEBBEECCC;>CDCA;BDD>@;C
+@D3FCO8P1:229:C49NHACXX:8:1101:1664:2088:4:N:0:TGGTCA
+TAATTTGTTNNNNNNNNNNNNTTCACAATTTGGTCAATAGCTTGCATAGAAAAATTANNNNNNNNNNNNNNNNNNNNNNNNNNTAATCCAGCNN
++
+2@>@@@@@@############11=???????????????????????>????@@@@@#####################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1512:2095:4:N:0:TGGTCA
+TTCTATCAGNNNNTTTNNNNNTAACTTATTGAGGTTTATGTGGTTCTTATACATTAANNNNNNNNNNNNNNNNNNNNNNNNNTGGGTTATTTNN
++
+2@@@?@@@@####43@#####11=???????8??>??>??????????????@@@@@#####################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1630:2114:4:N:0:TGGTCA
+AAGTTGGCANNNNATATNNNCGAAGATAATACACGTACACGTCATCCGCGATTTAGAANNNNNNNNNNNNNNNNNNNNNNNNCGCCAAGGTGNN
++
+2@@@@@@@?####33@@###14=???????????????????????????????????####################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1540:2119:4:N:0:TGGTCA
+CACACCAATNNNATTATNATGTTATTTAATACATTTATTAAAGAGAATAATGAAATTTNNNNNNNNNANNNNNNNNNNNNNNTATATTCTGCNN
++
+2@@@@@@@?###34@@@#1@????????????????????????????????@@@@@@####################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1503:2124:4:N:0:TGGTCA
+AAGAGAGTANNNATAAGATACTCCAAGCAAAAGCAGAGTATCTGTAAACACTTCGCTCNNNNNNNNNGNNNNNNNNNNNNNCCGTGCAAGTCNN
++
+2@??@?@??###44@@@@?@?@@@????????????>?<?????????????@@???@####################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1671:2150:4:N:0:TGGTCA
+AAGACAGTGACAATTCAAATTACACATGCGCGTTGCGCACTCACAGATACAAAGATACANNNANNNNCGGGCATACNTNNNAACAGAGCGACTG
++
+<@@@@@??@@@@?@@@@@@@@@@@@@@@???????????????????????????????###################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1552:2151:4:N:0:CACTGT
+ACATACTCAATATGTTTTACATATTTATGACAGACCTTCTCAAACAGAATATTTTACATNNNTTNNNCATTACCGTTTNNNCACAACACATTTT
++
+:@?@?@@@?????@@@@@@?@??@@@???@@?????????????????????@@@@@@@###-8###--=?????==?################
+@D3FCO8P1:229:C49NHACXX:8:1101:1700:2159:4:N:0:CACTGT
+GGCATACCTGCTGCCATTGGTCACACTGGCAGATTACGCGATTATTTTTTTTACGGAAANNNTGNNNTTTCCCTTCCGGNNTGAATTGCCTGGA
++
+:@@?@@@@@@@@@?@?@??@??@@@@??????<????????<?????????=<?########################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1652:2170:4:N:0:CACTGT
+GACCTACTAAACCTAACAATTCCAGCTATATTAACATTAGCTGAAGACACTAATCAGGAANAATTTAAAACAGAAAACATAATGGCACAGTCCA
++
+AACCCCCCBCCCBBB7CCCCCCBCCBBAABBBBBBBBBBBBBBBBBBBBBBBBBBBBBBB#.;AAABBAAAAA@AA@@@@@@B>==?AA????A
+@D3FCO8P1:229:C49NHACXX:8:1101:1537:2174:4:N:0:CACTGT
+AAGTCTTTGCGCAGACGGATCACCTCCTCGTTTGCAAGTGTGATAGGTACATCATGCTTTNTGTTCAAATCTTGGAAAATGAAATGTGCATGTA
++
+BB?FCBFG4?@@1<?A:6EF:?9)?00??:BDD1<B##########################################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1563:2176:4:N:0:CACTGT
+GACCGTTAGTCGGCGGGCGGTACCTGGTACCAGCGGGCGGCAAAAAAATAATGTGGGGAGGGGTCGGCGAAGTGTCGCTGAAAACGCCCCTTGC
++
+DDDD:@AE@AED@E?###############################################################################
+@D3FCO8P1:229:C49NHACXX:8:1101:1587:2187:4:N:0:CACTGT
+GGATCAACATTTTTTATAGCAACAGGATTTCACGGAATTCATGTATTAATCGGAACAACTTTTTTATTAGTATGTTTACTACGACATTTAAATA
++
+FFHHHHHJJJJJJJJJJJJJJJJJJJIJJJJJJJJIJJJJJJJIHGIGIIJJJIJJJJHHHHHHDDEEEEDEFEFEEDDDEDDDDDDDEEEDEE