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annotate test-data/TG/S_00000.gdm.meta @ 0:c74a1c7121ec draft default tip

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planemo upload for repository https://github.com/lu-brn/gmql-galaxy commit 953ee36ceda5814dc9baa03427bc0eb4ee2e93bd-dirty
author geco-team
date Tue, 26 Jun 2018 08:59:49 -0400
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0
c74a1c7121ec planemo upload for repository https://github.com/lu-brn/gmql-galaxy commit 953ee36ceda5814dc9baa03427bc0eb4ee2e93bd-dirty
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1 ID 1460
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2 avg_score 6
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3 cell AG04450
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4 cell_description fetal lung fibroblast
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5 cell_karyotype normal
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6 cell_lineage endoderm
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7 cell_orderUrl http://ccr.coriell.org/Sections/Search/Sample_Detail.aspx?Ref=AG04450
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8 cell_organism human
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9 cell_protocol Stam:AG04450_Stam_protocol.pdf
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10 cell_sex Female
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11 cell_tag AG04450
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12 cell_termId BTO:0000763
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13 cell_termUrl http://www.ebi.ac.uk/ontology-lookup/browse.do?ontName=BTO&termId=BTO%3A0000763
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14 cell_tier 3
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15 cell_tissue lung
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16 cell_type Cell Line
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17 cell_vendorId AG04450
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18 cell_vendorName Coriell
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19 composite wgEncodeUwDnase
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20 dataType DnaseSeq
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21 dataType_dataGroup Open Chromatin
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22 dataType_description DNaseI HS Sequencing
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23 dataType_label DNase-seq
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24 dataType_tag DNASESEQ
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25 dataType_type dataType
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26 dataVersion ENCODE June 2010 Freeze
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27 dateResubmitted 2010-06-17
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28 dateSubmitted 2010-01-07
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29 dateUnrestricted 2010-10-07
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30 dccAccession wgEncodeEH000506
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31 geoSampleAccession GSM736563
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32 grant Stam
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33 grant_description Stamatoyannopoulous
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34 grant_grantInst University of Washington
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35 grant_label Stamatoyannopoulous
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36 grant_projectName UW
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37 grant_tag STAM
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38 grant_type grant
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39 lab UW
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40 labExpId DS12255
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41 labVersion lmax-v1.0
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42 lab_description Stamatoyannopoulous - University of Washington
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43 lab_grantPi Stam
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44 lab_labInst University of Washington
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45 lab_labPi Stam
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46 lab_labPiFull John Stamatoyannopoulous
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47 lab_label Stamatoyannopoulous - UW
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48 lab_organism human
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49 lab_tag UW
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50 lab_type lab
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51 md5sum 1250e67a89764a7e877bca3bbee70f62
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52 origAssembly hg18
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53 patient_age 75
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54 project wgEncode
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55 replicate 2
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56 sex Female
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57 size 1.8M
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58 subId 1549
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59 tableName wgEncodeUwDnaseAg04450PkRep2
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60 treatment None
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61 treatment_description No special treatment or protocol applies
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62 treatment_label No treatment or prot
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63 treatment_tag NONE
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64 treatment_type control
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65 type narrowPeak
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66 url http://hgdownload.cse.ucsc.edu/goldenPath/hg19/encodeDCC/wgEncodeUwDnase/wgEncodeUwDnaseAg04450PkRep2.narrowPeak.gz
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67 view Peaks
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68 view_description Regions of enriched signal in experiment
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69 view_label Peaks
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70 view_tag PKS
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71 view_type view