Mercurial > repos > geert-vandeweyer > bamtools_wrappers
changeset 2:2572b6f85654 draft default tip
added samtools requirement to splitonrg
| author | geert-vandeweyer |
|---|---|
| date | Mon, 12 May 2014 02:06:26 -0400 |
| parents | 76aff7bca1b2 |
| children | |
| files | SplitOnRg.xml tool_dependencies.xml |
| diffstat | 2 files changed, 6 insertions(+), 0 deletions(-) [+] |
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--- a/SplitOnRg.xml Tue Feb 18 05:06:20 2014 -0500 +++ b/SplitOnRg.xml Mon May 12 02:06:26 2014 -0400 @@ -2,6 +2,8 @@ <description/> <requirements> <requirement type="package" version="2.3.0">bamtools</requirement> + <requirement type="package" version="0.1.18">samtools</requirement> + </requirements> <command interpreter="perl"> SplitOnRg.pl -i '$input1' -o $output1 -O $output1.id -k $dbkey -p $__new_file_path__
--- a/tool_dependencies.xml Tue Feb 18 05:06:20 2014 -0500 +++ b/tool_dependencies.xml Mon May 12 02:06:26 2014 -0400 @@ -3,4 +3,8 @@ <package name="bamtools" version="2.3.0"> <repository changeset_revision="def41213572b" name="package_bamtools_2_3_0" owner="geert-vandeweyer" toolshed="http://toolshed.g2.bx.psu.edu" /> </package> + <package name="samtools" version="0.1.18"> + <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" /> + </package> + </tool_dependency>