changeset 2:2572b6f85654 draft default tip

added samtools requirement to splitonrg
author geert-vandeweyer
date Mon, 12 May 2014 02:06:26 -0400
parents 76aff7bca1b2
children
files SplitOnRg.xml tool_dependencies.xml
diffstat 2 files changed, 6 insertions(+), 0 deletions(-) [+]
line wrap: on
line diff
--- a/SplitOnRg.xml	Tue Feb 18 05:06:20 2014 -0500
+++ b/SplitOnRg.xml	Mon May 12 02:06:26 2014 -0400
@@ -2,6 +2,8 @@
 <description/>
 <requirements>
 	<requirement type="package" version="2.3.0">bamtools</requirement>
+        <requirement type="package" version="0.1.18">samtools</requirement>
+	
 </requirements>
 <command interpreter="perl">
 SplitOnRg.pl -i '$input1' -o $output1 -O $output1.id -k $dbkey -p $__new_file_path__ 
--- a/tool_dependencies.xml	Tue Feb 18 05:06:20 2014 -0500
+++ b/tool_dependencies.xml	Mon May 12 02:06:26 2014 -0400
@@ -3,4 +3,8 @@
 	<package name="bamtools" version="2.3.0">
 		<repository changeset_revision="def41213572b" name="package_bamtools_2_3_0" owner="geert-vandeweyer" toolshed="http://toolshed.g2.bx.psu.edu" />
 	</package>
+   <package name="samtools" version="0.1.18">
+        <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="http://toolshed.g2.bx.psu.edu" />
+   </package>
+	
 </tool_dependency>