coverage_report: revision graph

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Wed, 29 Nov 2017 08:39:31 -0500, by geert-vandeweyer
revised routines. Better handling of collapsing, isoforms and mutiple mapppings. Barplots revised to visualise average base coverage in exon instead of total number of reads in exon draft
Wed, 29 Nov 2017 08:12:27 -0500, by geert-vandeweyer
Added BED format check before collapsing regions. draft
Thu, 12 Feb 2015 09:54:03 -0500, by geert-vandeweyer
Added (default) option to collapse repetitive bed files draft
Thu, 12 Feb 2015 08:51:37 -0500, by geert-vandeweyer
Added (default) option to collapse repetitive BED files. draft
Thu, 12 Feb 2015 08:51:06 -0500, by geert-vandeweyer
Correction to png calls to use cairo instead of x11. thanks to Eric Enns for pointing this out. draft
Mon, 17 Nov 2014 07:10:11 -0500, by geert-vandeweyer
Correction of tool_dependencies regarding R version draft
Thu, 06 Nov 2014 04:28:02 -0500, by geert-vandeweyer
changed tool.xml to request R 3.0.3 draft
Thu, 06 Nov 2014 03:40:42 -0500, by geert-vandeweyer
new version 0.0.3 (fix on headless R) draft
Thu, 06 Nov 2014 03:35:57 -0500, by geert-vandeweyer
Uploaded draft
Wed, 18 Jun 2014 08:18:10 -0400, by geert-vandeweyer
Uploaded draft
Wed, 18 Jun 2014 08:17:59 -0400, by geert-vandeweyer
correcting tool_dependencies draft
Wed, 18 Jun 2014 08:15:10 -0400, by geert-vandeweyer
Uploaded draft
Wed, 18 Jun 2014 08:14:43 -0400, by geert-vandeweyer
Somehow the tool dependencies got reversed to an old version leading to issues with R png function draft
Wed, 18 Jun 2014 07:26:16 -0400, by geert-vandeweyer
Uploaded draft
Thu, 20 Feb 2014 08:57:52 -0500, by geert-vandeweyer
Switched to R 3.0.2 from iuc, and moved bedtools to seperate tool_definition draft
Thu, 20 Feb 2014 08:57:09 -0500, by geert-vandeweyer
Hard Coded to use /usr/bin/Rscript instead of dependency one. Will revert when X11 issue is resolved. draft
Mon, 17 Feb 2014 09:49:16 -0500, by geert-vandeweyer
update to dependencies.xml draft
Fri, 14 Feb 2014 07:57:17 -0500, by geert-vandeweyer
Uploaded draft
Fri, 14 Feb 2014 07:55:49 -0500, by geert-vandeweyer
Change to tool_dependencies. BedTools would not install. draft
Thu, 13 Feb 2014 05:07:15 -0500, by geert-vandeweyer
Uploaded draft
Thu, 13 Feb 2014 04:49:58 -0500, by geert-vandeweyer
Deleted selected files draft
Thu, 13 Feb 2014 04:49:40 -0500, by geert-vandeweyer
Uploaded draft
Thu, 13 Feb 2014 04:46:46 -0500, by geert-vandeweyer
Uploaded draft
Thu, 13 Feb 2014 04:45:56 -0500, by geert-vandeweyer
Uploaded draft
Thu, 13 Feb 2014 04:45:48 -0500, by geert-vandeweyer
Uploaded draft
Thu, 13 Feb 2014 04:45:36 -0500, by geert-vandeweyer
Initial Uploaded draft
Thu, 05 Sep 2013 02:37:03 -0400, by geert-vandeweyer
Initial Uploaded draft
Thu, 05 Sep 2013 02:36:14 -0400, by geert-vandeweyer

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Mercurial > repos > geert-vandeweyer > coverage_report

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