# HG changeset patch
# User geert-vandeweyer
# Date 1392284748 18000
# Node ID 39c374d4cba700b09719c34ee8da6f3b6b8a6380
# Parent  a9555d172896c711a84f68f8d480f403a855b604
Uploaded

diff -r a9555d172896 -r 39c374d4cba7 CoverageReport.pl
--- a/CoverageReport.pl	Thu Feb 13 04:45:36 2014 -0500
+++ b/CoverageReport.pl	Thu Feb 13 04:45:48 2014 -0500
@@ -235,13 +235,13 @@
 $avg = $sum/$counter;
 close IN;
 open OUT, ">$wd/Rout/hist.txt";
+if (!defined($dens{'0'})) {
+	$dens{'0'} = 0;
+}
 foreach (keys(%dens)) {
 	print OUT "$_;$dens{$_}\n";
 }
 close OUT;
-if (!defined($dens{'0'})) {
-	$dens{'0'} = 0;
-}
 open OUT, ">$wd/Rout/ntplot.R";
 # read coverage hist in R to plot
 print OUT 'coverage <- read.table("hist.txt" , as.is = TRUE, header=FALSE,sep=";")'."\n";