Mercurial > repos > geert-vandeweyer > dc_genotyper
comparison DC_Genotyper.xml @ 22:ffebbccb694a draft default tip
updated tool_threading dependencies
| author | geert-vandeweyer |
|---|---|
| date | Thu, 07 Jan 2016 05:10:19 -0500 |
| parents | 8938f339ed37 |
| children |
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| 21:36e1ba3b4d1b | 22:ffebbccb694a |
|---|---|
| 3 <requirements> | 3 <requirements> |
| 4 <requirement type='package' version='3.0.2'>R_3_0_2</requirement> | 4 <requirement type='package' version='3.0.2'>R_3_0_2</requirement> |
| 5 <requirement type='package' version='0.1.19'>samtools</requirement> | 5 <requirement type='package' version='0.1.19'>samtools</requirement> |
| 6 <requirement type='package' version='0.2.6'>tabix</requirement> | 6 <requirement type='package' version='0.2.6'>tabix</requirement> |
| 7 <requirement type='package' version='latest'>blat_server</requirement> | 7 <requirement type='package' version='latest'>blat_server</requirement> |
| 8 <requirement type='package' version='1.92'>perl_module_threads</requirement> | 8 <requirement type='package' version='2.02'>perl_module_threads</requirement> |
| 9 <requirement type='package' version='1.46'>perl_module_threads_shared</requirement> | 9 <requirement type='package' version='1.48'>perl_module_threads_shared</requirement> |
| 10 <requirement type='package' version='3.02'>perl_module_Thread_Queue</requirement> | 10 <requirement type='package' version='3.07'>perl_module_Thread_Queue</requirement> |
| 11 <requirement type='package' version='2.3.32'>igvtools</requirement> | 11 <requirement type='package' version='2.3.32'>igvtools</requirement> |
| 12 </requirements> | 12 </requirements> |
| 13 <command interpreter="perl">DC_Genotyper.pl | 13 <command interpreter="perl">DC_Genotyper.pl |
| 14 -t "$targets" | 14 -t "$targets" |
| 15 -b "$bamfile" | 15 -b "$bamfile" |