Mercurial > repos > geert-vandeweyer > dc_genotyper
diff dbsnp_indexes.loc.sample @ 10:a7e7f9b8f538 draft
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| author | geert-vandeweyer |
|---|---|
| date | Sat, 27 Sep 2014 05:36:34 -0400 |
| parents | e8a32d824f39 |
| children |
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--- a/dbsnp_indexes.loc.sample Sat Sep 27 02:47:31 2014 -0400 +++ b/dbsnp_indexes.loc.sample Sat Sep 27 05:36:34 2014 -0400 @@ -5,13 +5,13 @@ #the directories in which those files are stored. The dbsnp_indexes.loc #file has this format (white space characters are TAB characters): # -#<unique_build_id> <display_name> </path/to/dbSNP.vcf.bgz> +#<unique_build_id> <dbkey> <display_name> </path/to/dbSNP.vcf.bgz> # #for example: # -#hg19 Human (Homo sapiens): hg19 /depot/data2/galaxy/dbsnp/dbsnp_137.hg19.vcf.bgz -#hg19 Human (Homo sapiens): hg19 /depot/data2/galaxy/dbsnp/dbsnp_138.hg19.vcf.bgz -#mm9 Mouse (Mus musculus): mm9 /depot/data2/galaxy/dbsnp/dbsnp_128.mm9.vcf.bgz +#hg19 hg19 Human (Homo sapiens): hg19 /depot/data2/galaxy/dbsnp/dbsnp_137.hg19.vcf.bgz +#hg19 hg19 Human (Homo sapiens): hg19 /depot/data2/galaxy/dbsnp/dbsnp_138.hg19.vcf.bgz +#mm9 mm9 Mouse (Mus musculus): mm9 /depot/data2/galaxy/dbsnp/dbsnp_128.mm9.vcf.bgz # #then your /depot/data2/galaxy/dbsnp/ directory #would need to contain the following files: