comparison tool_dependencies.xml @ 0:c78801ae8bb3 draft

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0:c78801ae8bb3

<?xml version="1.0"?>
<tool_dependency>
    <package name="bamtools" version="2.3.0">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz</action>
                <action type="shell_command">./configure &amp;&amp; make</action>
		<action type="move_file">
			<source>bin/</source>
			<destination>$INSTALL_DIR/bin</destination>
		</action>
                <action type="set_environment">
			<environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
        	BamTools provides both a programmer's API and an end-user's toolkit for handling BAM files. Both the BamTools API and toolkit are released under the MIT License. Copyright (c) 2009-2010 Derek Barnett, Erik Garrison, Gabor Marth, Michael Stromberg
	</readme>
    </package>
</tool_dependency>