annotate tool_dependencies.xml @ 1:3c087cee3b8f draft default tip

included a chmod u+x statement for the igvtools command.
author geert-vandeweyer
date Sun, 28 Sep 2014 07:48:30 -0400
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="igvtools" version="2.3.32">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url" target_filename="IGVTools.zip">http://www.broadinstitute.org/igv/projects/downloads/igvtools_2.3.32.zip</action>
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7 <action type="move_directory_files">
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8 <source_directory>.</source_directory>
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9 <destination_directory>$INSTALL_DIR/bin</destination_directory>
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3c087cee3b8f included a chmod u+x statement for the igvtools command.
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11 </action>
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3c087cee3b8f included a chmod u+x statement for the igvtools command.
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12 <action type="shell_command">chmod u+x $INSTALL_DIR/bin/igvtools</action>
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13 <action type="set_environment">
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14 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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15 </action>
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16 </actions>
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17 </install>
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18 <readme>
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19
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20 </readme>
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21 </package>
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22 </tool_dependency>