comparison tool_dependencies.xml @ 0:22493869d464 draft default tip

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author geert-vandeweyer
date Fri, 22 May 2015 08:23:02 -0400
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1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="twoBitToFa" version="latest">
4 <install version="1.0">
5 <actions_group>
6
7 <actions os="linux" architecture="x86_64">
8 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/twoBitToFa</action>
9 <action type="shell_command">chmod ugo+x *</action>
10 <action type="move_directory_files">
11 <source_directory>.</source_directory>
12 <destination_directory>$INSTALL_DIR/bin</destination_directory>
13 </action>
14 </actions>
15
16 <actions os="darwin" architecture="x86_64">
17 <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/twoBitToFa</action>
18 <action type="shell_command">chmod ugo+x *</action>
19 <action type="move_directory_files">
20 <source_directory>.</source_directory>
21 <destination_directory>$INSTALL_DIR/bin</destination_directory>
22 </action>
23 </actions>
24
25 <action type="set_environment">
26 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
27 </action>
28 </actions_group>
29 </install>
30 <readme>
31 Downloads and installs the latest toBitToFa from the UCSC.
32 It will try to install executable files from: UCSC ftp://hgdownload.cse.ucsc.edu/admin/exe/
33 ( The website doesn't offer previously released versions. )
34
35 </readme>
36 </package>
37
38 </tool_dependency>