Mercurial > repos > geert-vandeweyer > package_twobittofa
changeset 0:22493869d464 draft default tip
Uploaded
| author | geert-vandeweyer |
|---|---|
| date | Fri, 22 May 2015 08:23:02 -0400 |
| parents | |
| children | |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 38 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Fri May 22 08:23:02 2015 -0400 @@ -0,0 +1,38 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="twoBitToFa" version="latest"> + <install version="1.0"> + <actions_group> + + <actions os="linux" architecture="x86_64"> + <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/linux.x86_64/twoBitToFa</action> + <action type="shell_command">chmod ugo+x *</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + + <actions os="darwin" architecture="x86_64"> + <action type="download_file">ftp://hgdownload.cse.ucsc.edu/admin/exe/macOSX.x86_64/twoBitToFa</action> + <action type="shell_command">chmod ugo+x *</action> + <action type="move_directory_files"> + <source_directory>.</source_directory> + <destination_directory>$INSTALL_DIR/bin</destination_directory> + </action> + </actions> + + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable> + </action> + </actions_group> + </install> + <readme> +Downloads and installs the latest toBitToFa from the UCSC. +It will try to install executable files from: UCSC ftp://hgdownload.cse.ucsc.edu/admin/exe/ +( The website doesn't offer previously released versions. ) + + </readme> + </package> + +</tool_dependency>